Z. japonica Nagirizaki
Zjn_sc00034.1.g03070.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G16530.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 320 1 319 e-103 109.7 59.4 71.9
Subject 351 1 310
Annot | Symbols: PIN5 | Auxin efflux carrier family protein | chr5:5400735-5402626 FORWARD LENGTH=351
NR ref|XP_006645238.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 320 1 319 e-160 112.5 90 92.5
Subject 360 1 319
Annot PREDICTED: probable auxin efflux carrier component 6-like [Oryza brachyantha]
IRGSP Os01t0919800-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 320 1 319 e-157 113.4 89.7 91.9
Subject 363 1 322
Annot
Sbicolor Sobic.003G403900.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 320 1 319 e-147 117.5 86.6 88.4
Subject 376 1 335
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g03070.1.am.mk length: 320 aa.
IPR004776 Auxin efflux carrier
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF03547 Mem_trans 1.7e-63 10-318
no_ID  
HMMPanther PTHR31752 FAMILY 7.8e-145 2-313
HMMPanther PTHR31752:SF0 SUBFAMILY 7.8e-145 2-313
Seg seg seg NA 47-60
71-90
100-118
Pseudomolecule
Chromosome Start End Strand
61844575318447774-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker_non_over exon 1231881 1232575 . + . ID=Zjn_sc00034.1.g03070.1.am.mk:exon:1
Zjn_sc00034.1 maker_non_over exon 1233006 1233091 . + . ID=Zjn_sc00034.1.g03070.1.am.mk:exon:2
Zjn_sc00034.1 maker_non_over exon 1233721 1233902 . + . ID=Zjn_sc00034.1.g03070.1.am.mk:exon:3

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