Z. japonica Nagirizaki
Zjn_sc00034.1.g02770.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G50530.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 5 193 4e-45 282.5 55.7 72.7
Subject 548 335 545
Annot | Symbols: | CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein | chr5:20571876-20574922 REVERSE LENGTH=548
NR ref|XP_003564957.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 5 194 1e-66 283.5 80.4 86.1
Subject 550 333 549
Annot PREDICTED: CBS domain-containing protein CBSCBSPB1-like [Brachypodium distachyon]
IRGSP Os11t0496400-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 13 194 1e-42 114.4 54.6 68.6
Subject 222 1 221
Annot
Sbicolor Sobic.003G407100.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 194 5 194 5e-62 282 84 88.7
Subject 547 330 546
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g02770.1.am.mkhc length: 194 aa.
IPR000270 Phox/Bem1p
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00564 PB1 1.5e-12 79-143
HMMSmart SM00666 PB1 4.2e-08 52-145
no_ID  
Gene3D G3DSA:3.10.20.240 no description 5.2e-17 79-143
Seg seg seg NA 20-42
146-156
167-191
superfamily SSF54277 CAD 2.6e-15 39-143
Pseudomolecule
Chromosome Start End Strand
61858072118584581+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker exon 1095074 1095584 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:12
Zjn_sc00034.1 maker exon 1095655 1095744 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:11
Zjn_sc00034.1 maker exon 1095835 1095920 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:10
Zjn_sc00034.1 maker exon 1096029 1096066 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:9
Zjn_sc00034.1 maker exon 1096247 1096368 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:8
Zjn_sc00034.1 maker exon 1096708 1096948 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:7
Zjn_sc00034.1 maker exon 1097050 1097116 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:6
Zjn_sc00034.1 maker exon 1097205 1097318 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:5
Zjn_sc00034.1 maker exon 1097424 1097502 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:4
Zjn_sc00034.1 maker exon 1097669 1097839 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:3
Zjn_sc00034.1 maker exon 1097915 1098047 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:2
Zjn_sc00034.1 maker exon 1098152 1098934 . - . ID=Zjn_sc00034.1.g02770.1.am.mkhc:exon:1

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