Z. japonica Nagirizaki
Zjn_sc00034.1.g01530.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G41540.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 1 298 e-148 154.5 83.6 92
Subject 462 1 304
Annot | Symbols: GPDHC1 | 6-phosphogluconate dehydrogenase family protein | chr2:17326801-17328654 FORWARD LENGTH=462
NR ref|XP_004971215.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 1 298 e-167 152.5 95 98
Subject 456 1 298
Annot PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [Setaria italica] gi|835986124|ref|XP_012702026.1| PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [Setaria italica]
IRGSP Os01t0939600-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 1 298 e-167 152.5 93.6 97
Subject 456 1 298
Annot
Sbicolor Sobic.003G420800.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 299 1 298 e-168 153.2 94.6 98
Subject 458 1 300
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g01530.1.sm.mk length: 299 aa.
IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07479 NAD_Gly3P_dh_C 1.2e-07 267-297
IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent
Molecular Function GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity    
Biological Process GO:0006072 glycerol-3-phosphate metabolic process    
Cellular Component GO:0009331 glycerol-3-phosphate dehydrogenase complex    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00077 GPDHDRGNASE 4.2e-07 40-57
261-285
HMMPanther PTHR11728 GLYCEROL-3-PHOSPHATE 2.4e-73 1-292
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF48179 6-phosphogluconate 6.9e-06 267-292
IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
Cellular Component GO:0005737 cytoplasm    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Biological Process GO:0046168 glycerol-3-phosphate catabolic process    
Molecular Function GO:0051287 NAD binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01210 NAD_Gly3P_dh_N 1.7e-10 139-241
IPR013328 Dehydrogenase, multihelical
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor    
Molecular Function GO:0050662 coenzyme binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:1.10.1040.10 no description 1.4e-05 268-295
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 3.2e-41 36-266
no_ID  
Seg seg seg NA 2-13
18-28
superfamily SSF51735 NAD(P)-binding 5.6e-18 36-268
Pseudomolecule
Chromosome Start End Strand
61905386019056373+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker_non_over exon 623282 623295 . - . ID=Zjn_sc00034.1.g01530.1.sm.mk:exon:4
Zjn_sc00034.1 maker_non_over exon 623999 624025 . - . ID=Zjn_sc00034.1.g01530.1.sm.mk:exon:3
Zjn_sc00034.1 maker_non_over exon 624260 624481 . - . ID=Zjn_sc00034.1.g01530.1.sm.mk:exon:2
Zjn_sc00034.1 maker_non_over exon 625159 625795 . - . ID=Zjn_sc00034.1.g01530.1.sm.mk:exon:1

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