Z. japonica Nagirizaki
Zjn_sc00034.1.g01380.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G14800.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 6 238 1e-79 116 65.5 80.3
Subject 276 1 274
Annot | Symbols: P5CR, AT-P5R, AT-P5C1, EMB2772 | pyrroline-5- carboxylate (P5C) reductase | chr5:4786190-4787618 REVERSE LENGTH=276
NR ref|XP_004971242.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 1 238 e-114 118.9 91.2 97.9
Subject 283 1 283
Annot PREDICTED: pyrroline-5-carboxylate reductase [Setaria italica]
IRGSP Os01t0948400-02_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 18 238 e-102 119.3 79.8 87
Subject 284 17 282
Annot
Sbicolor Sobic.003G424300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 16 238 e-108 119.7 85.7 90.8
Subject 285 18 285
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g01380.1.sm.mkhc length: 238 aa.
IPR000304 Pyrroline-5-carboxylate reductase
method AccNumber shortName E-value location
Molecular Function GO:0004735 pyrroline-5-carboxylate reductase activity    
Biological Process GO:0006561 proline biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000193 Pyrroline-5-carboxylate 1.4e-59 19-238
HMMPanther PTHR11645 PYRROLINE-5-CARBOXYLATE 1.8e-81 3-238
PatternScan PS00521 P5CR NA 193-215
IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF48179 6-phosphogluconate 5.4e-30 134-237
IPR016040 NAD(P)-binding domain
Gene3D G3DSA:3.40.50.720 no description 3.6e-38 20-148
no_ID  
Gene3D G3DSA:1.10.3730.10 no description 6.7e-35 149-237
HMMPfam PF03807 F420_oxidored 3.5e-20 21-116
HMMPfam PF14748 P5CR_dimer 1.4e-33 144-237
Seg seg seg NA 2-15
77-88
93-111
superfamily SSF51735 NAD(P)-binding 1.2e-26 20-153
Pseudomolecule
Chromosome Start End Strand
61911794719123383-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker exon 556272 556499 . + . ID=Zjn_sc00034.1.g01380.1.sm.mkhc:exon:1
Zjn_sc00034.1 maker exon 556669 556717 . + . ID=Zjn_sc00034.1.g01380.1.sm.mkhc:exon:2
Zjn_sc00034.1 maker exon 556933 557024 . + . ID=Zjn_sc00034.1.g01380.1.sm.mkhc:exon:3
Zjn_sc00034.1 maker exon 557535 557607 . + . ID=Zjn_sc00034.1.g01380.1.sm.mkhc:exon:4
Zjn_sc00034.1 maker exon 558687 558778 . + . ID=Zjn_sc00034.1.g01380.1.sm.mkhc:exon:5
Zjn_sc00034.1 maker exon 558947 561708 . + . ID=Zjn_sc00034.1.g01380.1.sm.mkhc:exon:6

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