Z. japonica Nagirizaki
Zjn_sc00034.1.g00680.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G25970.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 169 318 7e-59 199.7 37.4 40.3
Subject 635 362 559
Annot | Symbols: PSD3 | phosphatidylserine decarboxylase 3 | chr4:13184240-13189139 FORWARD LENGTH=635
NR ref|XP_002862790.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 1 318 3e-78 157.2 56.9 74.2
Subject 500 1 425
Annot hypothetical protein ARALYDRAFT_359372 [Arabidopsis lyrata subsp. lyrata] gi|297308515|gb|EFH39048.1| hypothetical protein ARALYDRAFT_359372 [Arabidopsis lyrata subsp. lyrata]
IRGSP Os01t0959800-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 168 318 2e-68 127.4 42.1 44.7
Subject 405 125 323
Annot
Sbicolor Sobic.003G433800.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 318 1 165 7e-56 111.9 41.2 45
Subject 356 1 204
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00034.1.g00680.1.sm.mkhc length: 318 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMPfam PF13202 EF-hand_5 3.7e-07 135-158
HMMSmart SM00054 EF-hand, 0.00071 134-162
ProfileScan PS50222 EF_HAND_2 11.584 130-165
IPR003817 Phosphatidylserine decarboxylase-related
Molecular Function GO:0004609 phosphatidylserine decarboxylase activity    
Biological Process GO:0008654 phospholipid biosynthetic process    
HMMPfam PF02666 PS_Dcarbxylase 6.4e-17 204-251
247-318
IPR005221 Phosphatidylserine decarboxylase
Molecular Function GO:0004609 phosphatidylserine decarboxylase activity    
Biological Process GO:0008654 phospholipid biosynthetic process    
HMMPanther PTHR10067 PHOSPHATIDYLSERINE 2.2e-36 198-318
IPR011992 EF-hand domain pair
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 0.0002 135-178
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 143-155
no_ID  
HMMPanther PTHR10067:SF0 PHOSPHATIDYLSERINE 2.2e-36 198-318
Seg seg seg NA 4-35
Pseudomolecule
Chromosome Start End Strand
61941219719419169-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00034.1 maker exon 260486 260671 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:1
Zjn_sc00034.1 maker exon 260809 260888 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:2
Zjn_sc00034.1 maker exon 261488 261512 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:3
Zjn_sc00034.1 maker exon 262141 262200 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:4
Zjn_sc00034.1 maker exon 262320 262370 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:5
Zjn_sc00034.1 maker exon 263221 263312 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:6
Zjn_sc00034.1 maker exon 263549 263559 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:7
Zjn_sc00034.1 maker exon 264375 264475 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:8
Zjn_sc00034.1 maker exon 265293 265439 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:9
Zjn_sc00034.1 maker exon 266795 266869 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:10
Zjn_sc00034.1 maker exon 266991 267083 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:11
Zjn_sc00034.1 maker exon 267426 267458 . + . ID=Zjn_sc00034.1.g00680.1.sm.mkhc:exon:12

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