Z. japonica Nagirizaki
Zjn_sc00034.1.g00290.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G08200.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
200 |
10 |
196 |
6e-78 |
194.5 |
71 |
80 |
| Subject |
389 |
4 |
196 |
|
| Annot |
| Symbols: AXS2 | UDP-D-apiose/UDP-D-xylose synthase 2 | chr1:2574259-2576609 REVERSE LENGTH=389 |
| NR |
ref|NP_001105251.2| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
200 |
4 |
197 |
8e-88 |
197 |
81.5 |
87 |
| Subject |
394 |
2 |
201 |
|
| Annot |
dTDP-glucose 4,6-dehydratase [Zea mays] gi|195639652|gb|ACG39294.1| bifunctional polymyxin resistance arnA protein [Zea mays] gi|223950079|gb|ACN29123.1| unknown [Zea mays] gi|414878185|tpg|DAA55316.1| TPA: DTDP-glucose 4,6-dehydratase [Zea mays] |
| IRGSP |
Os01t0969100-01_chr01_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
200 |
13 |
197 |
2e-85 |
199 |
76.5 |
82 |
| Subject |
398 |
15 |
205 |
|
| Annot |
|
| Sbicolor |
Sobic.003G442300.1.p|Chr03|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
200 |
13 |
197 |
1e-86 |
198.5 |
77.5 |
83.5 |
| Subject |
397 |
14 |
204 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00034.1.g00290.1.sm.mkhc |
length: 200 aa. |
| IPR001509 |
NAD-dependent epimerase/dehydratase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0044237 |
cellular metabolic process |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| HMMPfam |
PF01370 |
Epimerase |
2.6e-23 |
26-154 |
| IPR016040 |
NAD(P)-binding domain |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
2.9e-25 |
25-164 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.25.10 |
no description |
6e-06 |
165-199 |
| HMMPanther |
PTHR10366 |
NAD |
2.6e-54 |
19-200 |
| HMMPanther |
PTHR10366:SF35 |
DTDP-GLUCOSE |
2.6e-54 |
19-200 |
| Seg |
seg |
seg |
NA |
2-9 |
| superfamily |
SSF51735 |
NAD(P)-binding |
6e-25 |
24-200 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 6 | 19546294 | 19549499 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00034.1 |
maker |
exon |
130156 |
130449 |
. |
+ |
. |
ID=Zjn_sc00034.1.g00290.1.sm.mkhc:exon:1 |
| Zjn_sc00034.1 |
maker |
exon |
130600 |
130692 |
. |
+ |
. |
ID=Zjn_sc00034.1.g00290.1.sm.mkhc:exon:2 |
| Zjn_sc00034.1 |
maker |
exon |
130797 |
130904 |
. |
+ |
. |
ID=Zjn_sc00034.1.g00290.1.sm.mkhc:exon:3 |
| Zjn_sc00034.1 |
maker |
exon |
132234 |
132335 |
. |
+ |
. |
ID=Zjn_sc00034.1.g00290.1.sm.mkhc:exon:4 |
| Zjn_sc00034.1 |
maker |
exon |
133356 |
133361 |
. |
+ |
. |
ID=Zjn_sc00034.1.g00290.1.sm.mkhc:exon:5 |