Z. japonica Nagirizaki
Zjn_sc00033.1.g02700.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G03840.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 56 267 8e-80 118.2 32.2 36.9
Subject 506 40 217
Annot | Symbols: MGP | C2H2 and C2HC zinc fingers superfamily protein | chr1:967596-970058 REVERSE LENGTH=506
NR gb|EMT17041.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 1 428 e-132 95.6 67.5 74.8
Subject 409 2 409
Annot Zinc finger protein MAGPIE [Aegilops tauschii]
IRGSP Os10t0419200-01_chr10_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 1 428 e-113 111 64 72
Subject 475 2 475
Annot
Sbicolor Sobic.001G242900.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 428 1 428 e-138 100 72 78.5
Subject 428 4 428
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00033.1.g02700.1.am.mk length: 428 aa.
IPR007087 Zinc finger, C2H2
method AccNumber shortName E-value location
Molecular Function GO:0046872 metal ion binding    
PatternScan PS00028 ZINC_FINGER_C2H2_1 NA 88-108
ProfileScan PS50157 ZINC_FINGER_C2H2_2 10.949 86-108
IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain
Molecular Function GO:0003676 nucleic acid binding    
Gene3D G3DSA:3.30.160.60 no description 0.00011 85-108
IPR015880 Zinc finger, C2H2-like
HMMSmart SM00355 zinc 99 86-108
142-172
177-197
no_ID  
HMMPanther PTHR10593 SERINE/THREONINE-PROTEIN 4.2e-110 56-287
HMMPanther PTHR10593:SF17 SUBFAMILY 4.2e-110 56-287
HMMPfam PF12874 zf-met 0.0027 86-108
Seg seg seg NA 29-56
119-137
246-258
261-273
330-347
superfamily SSF57667 C2H2 4.8e-09 84-197
Pseudomolecule
Chromosome Start End Strand
789467798949447+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00033.1 maker_non_over exon 2689342 2689540 . + . ID=Zjn_sc00033.1.g02700.1.am.mk:exon:1
Zjn_sc00033.1 maker_non_over exon 2689656 2689923 . + . ID=Zjn_sc00033.1.g02700.1.am.mk:exon:2
Zjn_sc00033.1 maker_non_over exon 2690051 2690281 . + . ID=Zjn_sc00033.1.g02700.1.am.mk:exon:3
Zjn_sc00033.1 maker_non_over exon 2691422 2692010 . + . ID=Zjn_sc00033.1.g02700.1.am.mk:exon:4

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