Z. japonica Nagirizaki
Zjn_sc00033.1.g01810.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G03760.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 219 16 142 5e-36 243.4 33.3 42
Subject 533 40 161
Annot | Symbols: ATCSLA09, CSLA09, ATCSLA9, CSLA9, RAT4 | Nucleotide-diphospho-sugar transferases superfamily protein | chr5:985910-990087 REVERSE LENGTH=533
NR ref|XP_002464637.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 219 24 142 6e-46 205.5 43.8 48.4
Subject 450 24 149
Annot hypothetical protein SORBIDRAFT_01g022320 [Sorghum bicolor] gi|241918491|gb|EER91635.1| hypothetical protein SORBIDRAFT_01g022320 [Sorghum bicolor]
IRGSP Os03t0169500-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 219 17 142 2e-41 250.7 41.1 47
Subject 549 39 176
Annot
Sbicolor Sobic.001G252700.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 219 24 142 6e-49 238.4 43.8 48.4
Subject 522 24 149
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00033.1.g01810.1.sm.mk length: 219 aa.
no_ID  
method AccNumber shortName E-value location
HMMPanther PTHR32044 FAMILY 1.3e-56 14-145
HMMPanther PTHR32044:SF0 SUBFAMILY 1.3e-56 14-145
Seg seg seg NA 2-23
49-59
superfamily SSF53448 Nucleotide-diphospho-sugar 1.8e-07 77-128
Pseudomolecule
Chromosome Start End Strand
782546168259145-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00033.1 maker_non_over exon 1997179 1997215 . - . ID=Zjn_sc00033.1.g01810.1.sm.mk:exon:5
Zjn_sc00033.1 maker_non_over exon 1997961 1998158 . - . ID=Zjn_sc00033.1.g01810.1.sm.mk:exon:4
Zjn_sc00033.1 maker_non_over exon 1999906 1999958 . - . ID=Zjn_sc00033.1.g01810.1.sm.mk:exon:3
Zjn_sc00033.1 maker_non_over exon 2000590 2000688 . - . ID=Zjn_sc00033.1.g01810.1.sm.mk:exon:2
Zjn_sc00033.1 maker_non_over exon 2001436 2001708 . - . ID=Zjn_sc00033.1.g01810.1.sm.mk:exon:1

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