Z. japonica Nagirizaki
Zjn_sc00033.1.g00030.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G67470.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 796 469 774 7e-58 112.9 20.2 26.8
Subject 899 452 873
Annot | Symbols: ATFH6, FH6 | formin homolog 6 | chr5:26926835-26930212 FORWARD LENGTH=899
NR ref|XP_002464424.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 796 106 771 0.0 94.8 63.6 69.3
Subject 755 27 727
Annot hypothetical protein SORBIDRAFT_01g018000 [Sorghum bicolor] gi|241918278|gb|EER91422.1| hypothetical protein SORBIDRAFT_01g018000 [Sorghum bicolor]
IRGSP Os03t0204100-01_chr03_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 796 103 774 e-113 112.1 47.7 55.9
Subject 892 32 870
Annot
Sbicolor Sobic.001G203700.1.p|Chr01|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 796 106 771 0.0 113.3 63.9 69.7
Subject 902 81 874
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00033.1.g00030.1.am.mk length: 796 aa.
IPR015425 Formin, FH2 domain
method AccNumber shortName E-value location
HMMPfam PF02181 FH2 3.1e-38 499-571
571-747
HMMSmart SM00498 Formin 4.4e-18 469-761
superfamily SSF101447 Formin 3e-58 413-766
no_ID  
HMMPanther PTHR23213 FORMIN-RELATED 4.9e-76 41-756
Seg seg seg NA 41-53
63-72
81-98
119-137
147-156
191-208
224-237
241-250
273-289
317-337
341-361
392-404
413-428
525-543
Pseudomolecule
Chromosome Start End Strand
764353416441608-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00033.1 maker_non_over exon 177904 178583 . - . ID=Zjn_sc00033.1.g00030.1.am.mk:exon:6
Zjn_sc00033.1 maker_non_over exon 179006 179128 . - . ID=Zjn_sc00033.1.g00030.1.am.mk:exon:5
Zjn_sc00033.1 maker_non_over exon 180234 180336 . - . ID=Zjn_sc00033.1.g00030.1.am.mk:exon:4
Zjn_sc00033.1 maker_non_over exon 180855 182215 . - . ID=Zjn_sc00033.1.g00030.1.am.mk:exon:3
Zjn_sc00033.1 maker_non_over exon 183282 183367 . - . ID=Zjn_sc00033.1.g00030.1.am.mk:exon:2
Zjn_sc00033.1 maker_non_over exon 184134 184171 . - . ID=Zjn_sc00033.1.g00030.1.am.mk:exon:1

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