Z. japonica Nagirizaki
Zjn_sc00032.1.g01940.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G45290.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 86 403 e-143 183.9 57.8 69
Subject 741 423 740
Annot | Symbols: | Transketolase | chr2:18672737-18675589 FORWARD LENGTH=741
NR ref|XP_004970575.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 86 403 e-166 178.4 70.2 75.7
Subject 719 402 719
Annot PREDICTED: transketolase, chloroplastic-like [Setaria italica]
IRGSP Os04t0266900-01_chr04_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 87 403 e-163 177.2 67.7 73.7
Subject 714 398 714
Annot
Sbicolor Sobic.006G034300.1.p|Chr06|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 86 403 e-168 180.1 70.2 74.9
Subject 726 409 726
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00032.1.g01940.1.sm.mkhc length: 403 aa.
IPR005474 Transketolase, N-terminal
method AccNumber shortName E-value location
HMMPfam PF00456 Transketolase_N 1.2e-30 1-85
IPR005475 Transketolase-like, pyrimidine-binding domain
HMMPfam PF02779 Transket_pyr 9.5e-43 95-265
HMMSmart SM00861 Transketolase, 1.4e-57 94-266
IPR005476 Transketolase, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF02780 Transketolase_C 1.7e-12 289-396
IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
superfamily SSF52922 TK 8.6e-44 268-403
IPR015941 Transketolase-like, C-terminal
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
Gene3D G3DSA:3.40.50.920 no description 2.2e-44 277-403
no_ID  
Gene3D G3DSA:3.40.50.970 no description 4.7e-69 1-82
83-272
HMMPanther PTHR11624 DEHYDROGENASE 5.3e-215 1-403
HMMPanther PTHR11624:SF1 TRANSKETOLASE 5.3e-215 1-403
Seg seg seg NA 301-312
superfamily SSF52518 Thiamin 2.2e-26 76-267
1-84
Pseudomolecule
Chromosome Start End Strand
871461987149110+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00032.1 maker exon 2365520 2366706 . - . ID=Zjn_sc00032.1.g01940.1.sm.mkhc:exon:4
Zjn_sc00032.1 maker exon 2367822 2368104 . - . ID=Zjn_sc00032.1.g01940.1.sm.mkhc:exon:3
Zjn_sc00032.1 maker exon 2368186 2368291 . - . ID=Zjn_sc00032.1.g01940.1.sm.mkhc:exon:2
Zjn_sc00032.1 maker exon 2368377 2368432 . - . ID=Zjn_sc00032.1.g01940.1.sm.mkhc:exon:1

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