Z. japonica Nagirizaki
Zjn_sc00032.1.g00020.1.am.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_004983106.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
175 |
1 |
174 |
5e-23 |
101.7 |
48 |
60.6 |
| Subject |
178 |
1 |
172 |
|
| Annot |
PREDICTED: protein TIFY 10A-like [Setaria italica] |
| IRGSP |
No_hits |
| Sbicolor |
Sobic.001G482600.1.p|Chr01|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
175 |
1 |
173 |
8e-15 |
110.9 |
37.1 |
52.6 |
| Subject |
194 |
3 |
181 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00032.1.g00020.1.am.mk |
length: 175 aa. |
| IPR010399 |
Tify |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06200 |
tify |
7.1e-14 |
76-109 |
| HMMSmart |
SM00979 |
no description |
3.8e-08 |
74-109 |
| ProfileScan |
PS51320 |
TIFY |
13.709 |
74-109 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 8 | 9482687 | 9483214 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00032.1 |
maker_non_over |
exon |
31416 |
31943 |
. |
+ |
. |
ID=Zjn_sc00032.1.g00020.1.am.mk:exon:1 |