Z. japonica Nagirizaki
Zjn_sc00031.1.g04310.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G10120.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1088 78 1088 0.0 96.5 54.9 68.6
Subject 1050 2 1044
Annot | Symbols: ATSPS4F | Sucrose-phosphate synthase family protein | chr4:6315033-6319785 FORWARD LENGTH=1050
NR gb|AAQ14552.1|AF310160_1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1088 76 1088 0.0 97 72.8 79.4
Subject 1055 1 1055
Annot sucrose-phosphate synthase [Triticum aestivum]
IRGSP Os08t0301500-01_chr08_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1088 78 1075 0.0 98 47.7 63.1
Subject 1066 2 1044
Annot
Sbicolor Sobic.005G089600.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1088 77 1088 0.0 98.3 74.6 79.9
Subject 1070 3 1070
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00031.1.g04310.1.am.mk length: 1088 aa.
IPR001296 Glycosyl transferase, family 1
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 6.3e-26 553-726
IPR006380 Sucrose-phosphate synthase
HMMPfam PF05116 S6PP 9.5e-09 897-1025
IPR012819 Sucrose phosphate synthase, plant
Biological Process GO:0005985 sucrose metabolic process    
Molecular Function GO:0046524 sucrose-phosphate synthase activity    
HMMTigr TIGR02468 sucrsPsyn_pln: 0 280-1086
no_ID  
Coil coil coiled-coil NA 212-233
Gene3D G3DSA:3.40.50.2000 no description 8.5e-23 551-728
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 0 114-778
HMMPanther PTHR12526:SF56 GLYCOSYLTRANSFERASE 0 114-778
HMMPfam PF13579 Glyco_trans_4_4 1.6e-11 280-478
Seg seg seg NA 33-38
56-75
102-117
184-202
210-223
326-338
403-415
493-508
526-543
771-783
856-870
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 6e-61 279-751
Pseudomolecule
Chromosome Start End Strand
1024533192458198+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00031.1 maker_non_over exon 2453319 2453401 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:1
Zjn_sc00031.1 maker_non_over exon 2453715 2454087 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:2
Zjn_sc00031.1 maker_non_over exon 2454203 2454361 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:3
Zjn_sc00031.1 maker_non_over exon 2454548 2454769 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:4
Zjn_sc00031.1 maker_non_over exon 2455265 2456030 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:5
Zjn_sc00031.1 maker_non_over exon 2456058 2456095 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:6
Zjn_sc00031.1 maker_non_over exon 2456211 2456342 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:7
Zjn_sc00031.1 maker_non_over exon 2456434 2456610 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:8
Zjn_sc00031.1 maker_non_over exon 2456693 2457522 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:9
Zjn_sc00031.1 maker_non_over exon 2457559 2457658 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:10
Zjn_sc00031.1 maker_non_over exon 2457745 2457872 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:11
Zjn_sc00031.1 maker_non_over exon 2457940 2458198 . + . ID=Zjn_sc00031.1.g04310.1.am.mk:exon:12

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