Z. japonica Nagirizaki
Zjn_sc00031.1.g04080.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G71450.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 196 20 101 3e-29 93.4 29.6 32.1
Subject 183 24 105
Annot | Symbols: | Integrase-type DNA-binding superfamily protein | chr1:26927088-26927639 FORWARD LENGTH=183
NR ref|XP_004979006.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 196 1 195 7e-62 100 71.9 79.1
Subject 196 1 195
Annot PREDICTED: ethylene-responsive transcription factor ERF024 [Setaria italica]
IRGSP Os11t0242300-00_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 196 3 196 1e-58 102.6 69.9 75.5
Subject 201 4 201
Annot
Sbicolor Sobic.005G087600.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 196 3 195 3e-68 145.9 75.5 82.1
Subject 286 81 285
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00031.1.g04080.1.am.mk length: 196 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 1.2e-12 20-31
58-78
Gene3D G3DSA:3.30.730.10 no description 1.3e-30 19-77
HMMPfam PF00847 AP2 9.2e-16 19-68
HMMSmart SM00380 DNA-binding 6e-38 19-82
ProfileScan PS51032 AP2_ERF 23.670 19-76
IPR016177 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 9.2e-24 18-79
no_ID  
HMMPanther PTHR31985 FAMILY 1e-42 20-102
Seg seg seg NA 62-73
117-127
137-152
160-171
Pseudomolecule
Chromosome Start End Strand
1022828842283474+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00031.1 maker_non_over exon 2282884 2283474 . + . ID=Zjn_sc00031.1.g04080.1.am.mk:exon:1

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