Z. japonica Nagirizaki
Zjn_sc00031.1.g02810.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G01720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 345 7 345 1e-79 83.8 49.6 59.1
Subject 289 5 289
Annot | Symbols: ATAF1, ANAC002 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:268471-269514 FORWARD LENGTH=289
NR ref|XP_004978885.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 345 1 344 e-119 102.9 77.7 82
Subject 355 1 353
Annot PREDICTED: NAC domain-containing protein 71-like [Setaria italica]
IRGSP Os11t0184900-02_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 345 1 345 e-120 95.4 72.5 77.4
Subject 329 1 329
Annot
Sbicolor Sobic.005G064600.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 345 1 345 e-122 132.5 75.1 81.2
Subject 457 74 457
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00031.1.g02810.1.am.mkhc length: 345 aa.
IPR003441 NAC domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02365 NAM 1.9e-48 9-133
ProfileScan PS51005 NAC 59.351 9-163
superfamily SSF101941 NAC 4.2e-59 5-164
no_ID  
HMMPanther PTHR31719 FAMILY 3.7e-115 1-345
Seg seg seg NA 186-204
210-220
269-281
288-316
Pseudomolecule
Chromosome Start End Strand
1013325301334898-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00031.1 maker exon 1332530 1333605 . - . ID=Zjn_sc00031.1.g02810.1.am.mkhc:exon:3
Zjn_sc00031.1 maker exon 1334201 1334487 . - . ID=Zjn_sc00031.1.g02810.1.am.mkhc:exon:2
Zjn_sc00031.1 maker exon 1334593 1334898 . - . ID=Zjn_sc00031.1.g02810.1.am.mkhc:exon:1

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