Z. japonica Nagirizaki
Zjn_sc00031.1.g02610.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G38620.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 1 271 6e-72 94.9 49.8 57.9
Subject 282 1 240
Annot | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282
NR ref|XP_004978868.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 1 297 e-107 94.3 75.1 80.5
Subject 280 1 280
Annot PREDICTED: myb-related protein Zm38-like [Setaria italica]
IRGSP Os11t0180900-00_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 1 279 9e-94 99.3 63 67.7
Subject 295 1 270
Annot
Sbicolor Sobic.005G062000.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 297 1 297 6e-97 146.8 71.7 77.4
Subject 436 122 436
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00031.1.g02610.1.sm.mk length: 297 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 5.6e-16 14-61
67-111
HMMSmart SM00717 SANT 4e-18 13-63
66-114
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 3e-27 5-64
65-116
superfamily SSF46689 Homeodomain-like 1.6e-26 14-113
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 16.206 62-116
9-61
no_ID  
HMMPanther PTHR10641 MYB-LIKE 2.8e-106 1-223
HMMPanther PTHR10641:SF203SUBFAMILY NOT 2.8e-106 1-223
Seg seg seg NA 131-141
188-201
235-245
265-275
Pseudomolecule
Chromosome Start End Strand
1012182111219421+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00031.1 maker_non_over exon 1218211 1218343 . + . ID=Zjn_sc00031.1.g02610.1.sm.mk:exon:1
Zjn_sc00031.1 maker_non_over exon 1218528 1218657 . + . ID=Zjn_sc00031.1.g02610.1.sm.mk:exon:2
Zjn_sc00031.1 maker_non_over exon 1218791 1219421 . + . ID=Zjn_sc00031.1.g02610.1.sm.mk:exon:3

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