Z. japonica Nagirizaki
Zjn_sc00031.1.g01750.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G21200.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
175 |
1 |
139 |
3e-24 |
253.1 |
39.4 |
49.7 |
| Subject |
443 |
85 |
233 |
|
| Annot |
| Symbols: | sequence-specific DNA binding transcription factors | chr1:7421483-7422814 FORWARD LENGTH=443 |
| NR |
ref|NP_001143969.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
175 |
2 |
93 |
2e-40 |
249.1 |
44.6 |
48.6 |
| Subject |
436 |
89 |
180 |
|
| Annot |
uncharacterized protein LOC100276786 [Zea mays] gi|195634683|gb|ACG36810.1| hypothetical protein [Zea mays] |
| IRGSP |
Os12t0163500-01_chr12_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
175 |
1 |
93 |
5e-40 |
246.9 |
43.4 |
46.9 |
| Subject |
432 |
78 |
170 |
|
| Annot |
|
| Sbicolor |
Sobic.005G047200.1.p|Chr05|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
175 |
2 |
93 |
8e-43 |
231.4 |
44 |
49.1 |
| Subject |
405 |
63 |
154 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00031.1.g01750.1.am.mkhc |
length: 175 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR31292 |
FAMILY |
1.5e-38 |
1-93 |
| HMMPfam |
PF13837 |
Myb_DNA-bind_4 |
1.9e-12 |
29-96 |
| Seg |
seg |
seg |
NA |
107-129 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 10 | 858213 | 859896 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00031.1 |
maker |
exon |
858213 |
858490 |
. |
+ |
. |
ID=Zjn_sc00031.1.g01750.1.am.mkhc:exon:1 |
| Zjn_sc00031.1 |
maker |
exon |
858743 |
858943 |
. |
+ |
. |
ID=Zjn_sc00031.1.g01750.1.am.mkhc:exon:2 |
| Zjn_sc00031.1 |
maker |
exon |
859497 |
859896 |
. |
+ |
. |
ID=Zjn_sc00031.1.g01750.1.am.mkhc:exon:3 |