Z. japonica Nagirizaki
Zjn_sc00031.1.g01570.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G24470.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 611 1 143 2e-33 109.2 11.6 15.5
Subject 667 192 339
Annot | Symbols: APRR5, PRR5 | pseudo-response regulator 5 | chr5:8356204-8358873 REVERSE LENGTH=667
NR ref|XP_004978734.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 611 1 611 0.0 114.6 74.8 82.2
Subject 700 87 697
Annot PREDICTED: two-component response regulator-like APRR3 [Setaria italica]
IRGSP Os11t0157600-01_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 611 1 611 0.0 114.1 69.9 79.7
Subject 697 75 697
Annot
Sbicolor Sobic.005G044400.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 611 1 611 0.0 114.1 70.4 78.7
Subject 697 88 696
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00031.1.g01570.1.sm.mkhc length: 611 aa.
IPR001789 Signal transduction response regulator, receiver domain
method AccNumber shortName E-value location
Molecular Function GO:0000156 phosphorelay response regulator activity    
Biological Process GO:0000160 phosphorelay signal transduction system    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF00072 Response_reg 2.5e-15 3-81
ProfileScan PS50110 RESPONSE_REGULATORY 21.675 1-87
IPR010402 CCT domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 5.7e-18 556-599
ProfileScan PS51017 CCT 14.922 556-598
IPR011006 CheY-like superfamily
superfamily SSF52172 CheY-like 4e-20 2-95
no_ID  
Gene3D G3DSA:3.40.50.2300 no description 2.2e-24 2-107
HMMPanther PTHR26402 RESPONSE 2.8e-25 1-143
HMMPanther PTHR26402:SF256TWO-COMPONENT RESPONSE 2.8e-25 1-143
Seg seg seg NA 93-126
156-166
388-401
466-477
Pseudomolecule
Chromosome Start End Strand
10769159773304+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00031.1 maker exon 769159 769300 . + . ID=Zjn_sc00031.1.g01570.1.sm.mkhc:exon:1
Zjn_sc00031.1 maker exon 770313 770443 . + . ID=Zjn_sc00031.1.g01570.1.sm.mkhc:exon:2
Zjn_sc00031.1 maker exon 770687 770800 . + . ID=Zjn_sc00031.1.g01570.1.sm.mkhc:exon:3
Zjn_sc00031.1 maker exon 771086 771242 . + . ID=Zjn_sc00031.1.g01570.1.sm.mkhc:exon:4
Zjn_sc00031.1 maker exon 771355 771751 . + . ID=Zjn_sc00031.1.g01570.1.sm.mkhc:exon:5
Zjn_sc00031.1 maker exon 771876 772659 . + . ID=Zjn_sc00031.1.g01570.1.sm.mkhc:exon:6
Zjn_sc00031.1 maker exon 772777 773304 . + . ID=Zjn_sc00031.1.g01570.1.sm.mkhc:exon:7

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