Z. japonica Nagirizaki
Zjn_sc00031.1.g00440.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G08490.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 377 1 319 e-144 122.8 63.9 71.9
Subject 463 89 407
Annot | Symbols: ATSUFS, SUFS, ATCPNIFS, ATNFS2, CPNIFS | chloroplastic NIFS-like cysteine desulfurase | chr1:2685980-2688547 REVERSE LENGTH=463
NR ref|XP_006663953.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 377 1 333 e-174 99.5 78.2 82.8
Subject 375 1 333
Annot PREDICTED: cysteine desulfurase 2, chloroplastic-like [Oryza brachyantha]
IRGSP Os12t0287300-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 377 50 333 e-147 86.5 64.7 70
Subject 326 1 284
Annot
Sbicolor Sobic.005G014700.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 377 1 333 e-176 139 77.2 82.8
Subject 524 150 482
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00031.1.g00440.1.am.mkhc length: 377 aa.
IPR000192 Aminotransferase, class V/Cysteine desulfurase
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
HMMPfam PF00266 Aminotran_5 1.3e-114 2-318
IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.40.640.10 no description 5.6e-80 3-244
IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0030170 pyridoxal phosphate binding    
Gene3D G3DSA:3.90.1150.10 no description 6.2e-16 245-318
IPR015424 Pyridoxal phosphate-dependent transferase
superfamily SSF53383 PLP-dependent 2.4e-93 1-317
no_ID  
HMMPanther PTHR11601 CYSTEINE 3.1e-106 4-317
Seg seg seg NA 240-251
263-275
354-366
Pseudomolecule
Chromosome Start End Strand
10205906217665+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00031.1 maker exon 205906 205999 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:1
Zjn_sc00031.1 maker exon 213610 213743 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:2
Zjn_sc00031.1 maker exon 214051 214210 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:3
Zjn_sc00031.1 maker exon 214544 214730 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:4
Zjn_sc00031.1 maker exon 215032 215177 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:5
Zjn_sc00031.1 maker exon 215267 215339 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:6
Zjn_sc00031.1 maker exon 215487 215550 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:7
Zjn_sc00031.1 maker exon 216094 216193 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:8
Zjn_sc00031.1 maker exon 216350 216508 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:9
Zjn_sc00031.1 maker exon 217489 217665 . + . ID=Zjn_sc00031.1.g00440.1.am.mkhc:exon:10

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