Z. japonica Nagirizaki
Zjn_sc00030.1.g03500.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G16010.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 7 266 1e-64 100.8 45.1 66.2
Subject 268 7 268
Annot | Symbols: | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | chr5:5227982-5229012 FORWARD LENGTH=268
NR ref|XP_004955510.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 1 266 2e-87 103 68.8 77.8
Subject 274 2 274
Annot PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 1-like [Setaria italica]
IRGSP Os07t0162100-00_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 1 266 4e-76 104.1 63.9 72.6
Subject 277 1 277
Annot
Sbicolor Sobic.002G041000.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 266 1 266 3e-80 107.5 68 78.6
Subject 286 1 286
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00030.1.g03500.1.sm.mkhc length: 266 aa.
IPR001104 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
method AccNumber shortName E-value location
Cellular Component GO:0005737 cytoplasm    
Biological Process GO:0006629 lipid metabolic process    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors    
HMMPfam PF02544 Steroid_dh 1.4e-26 125-266
ProfileScan PS50244 S5A_REDUCTASE 24.793 159-240
no_ID  
HMMPanther PTHR10556 3-OXO-5-ALPHA-STEROID 3.5e-65 29-266
HMMPanther PTHR10556:SF2 3-OXO-5-ALPHA-STEROID 3.5e-65 29-266
Seg seg seg NA 67-78
89-100
Pseudomolecule
Chromosome Start End Strand
43175732924+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00030.1 maker exon 2752505 2753259 . - . ID=Zjn_sc00030.1.g03500.1.sm.mkhc:exon:2
Zjn_sc00030.1 maker exon 2753349 2753672 . - . ID=Zjn_sc00030.1.g03500.1.sm.mkhc:exon:1

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