Z. japonica Nagirizaki
Zjn_sc00030.1.g02090.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_012699010.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 470 29 446 1e-84 193.2 44.7 56.6
Subject 908 19 467
Annot PREDICTED: uncharacterized protein LOC101757510 [Setaria italica]
IRGSP Os07t0535100-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 470 26 283 1e-31 80.2 20 29.4
Subject 377 13 252
Annot
Sbicolor Sobic.002G139000.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 470 29 284 5e-60 90.9 29.1 37.7
Subject 427 36 298
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00030.1.g02090.1.sm.mk length: 470 aa.
IPR001810 F-box domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 6.2e-08 27-61
297-335
HMMSmart SM00256 A 2.5e-06 28-67
301-341
ProfileScan PS50181 FBOX 9.286 295-341
superfamily SSF81383 F-box 1.7e-09 15-127
288-334
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 4.9e-07 28-59
294-332
Seg seg seg NA 285-300
334-343
395-405
Pseudomolecule
Chromosome Start End Strand
4901570915885-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00030.1 maker_non_over exon 1869544 1870399 . + . ID=Zjn_sc00030.1.g02090.1.sm.mk:exon:1
Zjn_sc00030.1 maker_non_over exon 1881351 1881857 . + . ID=Zjn_sc00030.1.g02090.1.sm.mk:exon:2
Zjn_sc00030.1 maker_non_over exon 1883810 1883859 . + . ID=Zjn_sc00030.1.g02090.1.sm.mk:exon:3

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