Z. japonica Nagirizaki
Zjn_sc00030.1.g01580.1.cf.mkhc
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|NP_001130126.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
270 |
1 |
269 |
e-122 |
155.6 |
77.8 |
87.8 |
| Subject |
420 |
148 |
419 |
|
| Annot |
hypothetical protein [Zea mays] gi|194688354|gb|ACF78261.1| unknown [Zea mays] gi|414887290|tpg|DAA63304.1| TPA: hypothetical protein ZEAMMB73_405968 [Zea mays] gi|414887291|tpg|DAA63305.1| TPA: hypothetical protein ZEAMMB73_405968 [Zea mays] |
| IRGSP |
Os07t0242600-01_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
270 |
3 |
268 |
6e-33 |
147 |
38.5 |
55.2 |
| Subject |
397 |
125 |
397 |
|
| Annot |
|
| Sbicolor |
Sobic.008G045600.1.p|Chr08|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
270 |
1 |
158 |
2e-62 |
112.6 |
41.1 |
49.3 |
| Subject |
304 |
129 |
283 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00030.1.g01580.1.cf.mkhc |
length: 270 aa. |
| IPR017451 |
F-box associated interaction domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
9.9e-14 |
3-244 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 4 | 1277112 | 1279741 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00030.1 |
maker |
exon |
1505688 |
1506511 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01580.1.cf.mkhc:exon:1 |
| Zjn_sc00030.1 |
maker |
exon |
1507353 |
1508317 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01580.1.cf.mkhc:exon:2 |