Z. japonica Nagirizaki
Zjn_sc00030.1.g01560.1.cf.mkhc
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
ref|XP_002461648.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
294 |
8 |
290 |
6e-63 |
138.1 |
50.3 |
63.6 |
| Subject |
406 |
112 |
401 |
|
| Annot |
hypothetical protein SORBIDRAFT_02g005890 [Sorghum bicolor] gi|241925025|gb|EER98169.1| hypothetical protein SORBIDRAFT_02g005890 [Sorghum bicolor] |
| IRGSP |
Os07t0196300-01_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
294 |
18 |
291 |
2e-27 |
137.4 |
34.4 |
49.7 |
| Subject |
404 |
122 |
400 |
|
| Annot |
|
| Sbicolor |
Sobic.002G070100.3.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
294 |
8 |
290 |
6e-66 |
164.6 |
50.3 |
63.6 |
| Subject |
484 |
190 |
479 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00030.1.g01560.1.cf.mkhc |
length: 294 aa. |
| IPR013187 |
F-box associated domain, type 3 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08268 |
FBA_3 |
1.1e-05 |
126-226 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
1.4e-14 |
67-256 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
125-131 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 4 | 1286955 | 1289938 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00030.1 |
maker |
exon |
1495491 |
1496379 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01560.1.cf.mkhc:exon:1 |
| Zjn_sc00030.1 |
maker |
exon |
1497969 |
1498474 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01560.1.cf.mkhc:exon:2 |