Z. japonica Nagirizaki
Zjn_sc00030.1.g01370.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G04870.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 383 33 307 e-107 145.7 50.7 58
Subject 558 20 294
Annot | Symbols: ZDS, PDE181, SPC1 | zeta-carotene desaturase | chr3:1342842-1346189 FORWARD LENGTH=558
NR ref|NP_001105609.2| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 383 1 303 e-130 149.3 63.4 67.1
Subject 572 1 300
Annot zeta-carotene desaturase, chloroplastic/chromoplastic [Zea mays] gi|414883938|tpg|DAA59952.1| TPA: zeta-carotene desaturase, /chromoplastic Precursor [Zea mays]
IRGSP Os07t0204900-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 383 2 303 e-123 150.9 59.8 63.4
Subject 578 5 306
Annot
Sbicolor Sobic.002G072400.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 383 16 303 e-125 171.8 60.3 64
Subject 658 100 386
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00030.1.g01370.1.sm.mkhc length: 383 aa.
IPR002937 Amine oxidase
method AccNumber shortName E-value location
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01593 Amino_oxidase 1.7e-25 79-248
no_ID  
FPrintScan PR00419 ADXRDTASE 5e-07 71-93
94-107
134-144
Gene3D G3DSA:3.50.50.60 no description 9.3e-22 219-220
HMMPanther PTHR10742 AMINE 2.4e-106 1-371
HMMPanther PTHR10742:SF6 CAROTENE 2.4e-106 1-371
Seg seg seg NA 2-26
28-39
superfamily SSF51905 FAD/NAD(P)-binding 1.5e-20 49-357
Pseudomolecule
Chromosome Start End Strand
414564821461424+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00030.1 maker exon 1324005 1324500 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:12
Zjn_sc00030.1 maker exon 1325054 1325126 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:11
Zjn_sc00030.1 maker exon 1325259 1325316 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:10
Zjn_sc00030.1 maker exon 1325563 1325612 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:9
Zjn_sc00030.1 maker exon 1325997 1326060 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:8
Zjn_sc00030.1 maker exon 1326320 1326416 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:7
Zjn_sc00030.1 maker exon 1326586 1326672 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:6
Zjn_sc00030.1 maker exon 1327017 1327090 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:5
Zjn_sc00030.1 maker exon 1327511 1327583 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:4
Zjn_sc00030.1 maker exon 1327902 1328036 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:3
Zjn_sc00030.1 maker exon 1328134 1328258 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:2
Zjn_sc00030.1 maker exon 1328791 1328947 . - . ID=Zjn_sc00030.1.g01370.1.sm.mkhc:exon:1

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