Z. japonica Nagirizaki
Zjn_sc00030.1.g01330.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT5G13710.2 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
156 |
7 |
93 |
3e-28 |
215.4 |
42.3 |
49.4 |
| Subject |
336 |
1 |
134 |
|
| Annot |
| Symbols: SMT1, CPH | sterol methyltransferase 1 | chr5:4424048-4426866 REVERSE LENGTH=336 |
| NR |
gb|KGN58577.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
156 |
1 |
155 |
4e-52 |
178.8 |
82.1 |
92.3 |
| Subject |
279 |
1 |
276 |
|
| Annot |
hypothetical protein Csa_3G689270 [Cucumis sativus] |
| IRGSP |
Os07t0206700-01_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
156 |
1 |
93 |
8e-40 |
220.5 |
54.5 |
58.3 |
| Subject |
344 |
1 |
140 |
|
| Annot |
|
| Sbicolor |
Sobic.009G244900.2.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
156 |
1 |
93 |
4e-40 |
220.5 |
56.4 |
57.7 |
| Subject |
344 |
1 |
140 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00030.1.g01330.1.sm.mkhc |
length: 156 aa. |
| IPR013705 |
Sterol methyltransferase C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006694 |
steroid biosynthetic process |
|
|
| Molecular Function |
GO:0008168 |
methyltransferase activity |
|
|
| HMMPfam |
PF08498 |
Sterol_MT_C |
2.3e-25 |
106-153 |
| no_ID |
|
| HMMPanther |
PTHR10108 |
METHYLTRANSFERASE |
3.4e-19 |
10-93 |
| HMMPanther |
PTHR10108:SF21 |
S-ADENOSYL-L-METHIONINE:DELTA24-STEROL-C-METHYLTRANSFERASET[10-93] |
3.4e-19 |
|
| Seg |
seg |
seg |
NA |
28-41 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 4 | 1488048 | 1492525 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00030.1 |
maker |
exon |
1292904 |
1293094 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:1 |
| Zjn_sc00030.1 |
maker |
exon |
1294133 |
1294199 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:2 |
| Zjn_sc00030.1 |
maker |
exon |
1294485 |
1294558 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:3 |
| Zjn_sc00030.1 |
maker |
exon |
1295211 |
1295265 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:4 |
| Zjn_sc00030.1 |
maker |
exon |
1296208 |
1296243 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:5 |
| Zjn_sc00030.1 |
maker |
exon |
1296599 |
1296696 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:6 |
| Zjn_sc00030.1 |
maker |
exon |
1296811 |
1296879 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:7 |
| Zjn_sc00030.1 |
maker |
exon |
1296971 |
1297381 |
. |
+ |
. |
ID=Zjn_sc00030.1.g01330.1.sm.mkhc:exon:8 |