Z. japonica Nagirizaki
Zjn_sc00030.1.g00750.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT2G40690.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
138 |
70 |
121 |
8e-20 |
304.3 |
31.9 |
37 |
| Subject |
420 |
366 |
417 |
|
| Annot |
| Symbols: GLY1, SFD1 | NAD-dependent glycerol-3-phosphate dehydrogenase family protein | chr2:16974107-16976241 FORWARD LENGTH=420 |
| NR |
gb|EMT18761.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
138 |
47 |
124 |
4e-20 |
385.5 |
37.7 |
44.2 |
| Subject |
532 |
455 |
532 |
|
| Annot |
Glycerol-3-phosphate dehydrogenase (NAD(P)+) [Aegilops tauschii] |
| IRGSP |
Os07t0229800-01_chr07_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
138 |
1 |
33 |
1e-10 |
145.7 |
21 |
21.7 |
| Subject |
201 |
122 |
154 |
|
| Annot |
|
| Sbicolor |
Sobic.002G081500.1.p|Chr02|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
138 |
70 |
121 |
9e-21 |
311.6 |
34.1 |
36.2 |
| Subject |
430 |
376 |
427 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00030.1.g00750.1.sm.mkhc |
length: 138 aa. |
| IPR006109 |
Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004367 |
glycerol-3-phosphate dehydrogenase [NAD+] activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF07479 |
NAD_Gly3P_dh_C |
4.3e-08 |
67-114 |
| IPR008927 |
6-phosphogluconate dehydrogenase, C-terminal-like |
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| superfamily |
SSF48179 |
6-phosphogluconate |
2.5e-10 |
51-123 |
| IPR013328 |
Dehydrogenase, multihelical |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Molecular Function |
GO:0016616 |
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
|
|
| Molecular Function |
GO:0050662 |
coenzyme binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| Gene3D |
G3DSA:1.10.1040.10 |
no description |
7.5e-12 |
49-120 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 4 | 1994107 | 1997500 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00030.1 |
maker |
exon |
787929 |
788050 |
. |
+ |
. |
ID=Zjn_sc00030.1.g00750.1.sm.mkhc:exon:1 |
| Zjn_sc00030.1 |
maker |
exon |
789169 |
789256 |
. |
+ |
. |
ID=Zjn_sc00030.1.g00750.1.sm.mkhc:exon:2 |
| Zjn_sc00030.1 |
maker |
exon |
790711 |
790860 |
. |
+ |
. |
ID=Zjn_sc00030.1.g00750.1.sm.mkhc:exon:3 |
| Zjn_sc00030.1 |
maker |
exon |
791266 |
791322 |
. |
+ |
. |
ID=Zjn_sc00030.1.g00750.1.sm.mkhc:exon:4 |