Z. japonica Nagirizaki
Zjn_sc00030.1.g00640.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G05300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 140 465 6e-88 77.4 37.2 46.9
Subject 360 36 360
Annot | Symbols: ZIP5 | zinc transporter 5 precursor | chr1:1545258-1547709 REVERSE LENGTH=360
NR ref|NP_001148241.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 146 465 e-128 85.4 53.1 58.3
Subject 397 52 397
Annot ZIP zinc/iron transport family protein precursor [Zea mays] gi|195616882|gb|ACG30271.1| ZIP zinc/iron transport family protein [Zea mays] gi|414884075|tpg|DAA60089.1| TPA: ZIP zinc/iron transport family protein [Zea mays]
IRGSP Os07t0232800-00_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 152 465 e-129 76.8 51.6 57
Subject 357 49 357
Annot
Sbicolor Sobic.002G083200.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 146 465 e-128 82.2 52.7 58.7
Subject 382 41 382
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00030.1.g00640.1.am.mk length: 465 aa.
IPR003689 Zinc/iron permease
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Biological Process GO:0030001 metal ion transport    
Molecular Function GO:0046873 metal ion transmembrane transporter activity    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF02535 Zip 1.7e-63 152-462
IPR004698 Zinc/iron permease, fungal/plant
Molecular Function GO:0005385 zinc ion transmembrane transporter activity    
Cellular Component GO:0016021 integral to membrane    
Biological Process GO:0071577 zinc ion transmembrane transport    
HMMTigr TIGR00820 zip: 3.8e-122 143-465
no_ID  
HMMPanther PTHR11040 ZINC/IRON 1e-148 136-465
HMMPanther PTHR11040:SF1 ZINC/IRON 1e-148 136-465
Seg seg seg NA 113-150
169-184
285-298
318-334
Pseudomolecule
Chromosome Start End Strand
420771652079835-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00030.1 maker_non_over exon 705594 705751 . + . ID=Zjn_sc00030.1.g00640.1.am.mk:exon:1
Zjn_sc00030.1 maker_non_over exon 705838 706555 . + . ID=Zjn_sc00030.1.g00640.1.am.mk:exon:2
Zjn_sc00030.1 maker_non_over exon 706583 706648 . + . ID=Zjn_sc00030.1.g00640.1.am.mk:exon:3
Zjn_sc00030.1 maker_non_over exon 707204 707353 . + . ID=Zjn_sc00030.1.g00640.1.am.mk:exon:4
Zjn_sc00030.1 maker_non_over exon 707959 708264 . + . ID=Zjn_sc00030.1.g00640.1.am.mk:exon:5

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