Z. japonica Nagirizaki
Zjn_sc00030.1.g00070.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G15960.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 461 108 461 3e-91 114.3 39.5 53.1
Subject 527 169 518
Annot | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527
NR ref|XP_004955906.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 461 108 461 e-153 115.4 64.9 68.3
Subject 532 174 532
Annot PREDICTED: metal transporter Nramp5-like [Setaria italica]
IRGSP Os07t0257200-01_chr07_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 461 108 461 e-149 116.7 59.9 66.2
Subject 538 175 538
Annot
Sbicolor Sobic.002G095400.1.p|Chr02|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 461 108 461 e-150 123.6 62.5 67.5
Subject 570 210 570
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00030.1.g00070.1.sm.mkhc length: 461 aa.
IPR001046 Natural resistance-associated macrophage like
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00447 NATRESASSCMP 1.3e-37 109-130
159-182
295-314
323-340
HMMPanther PTHR11706 MANGANESE 8.6e-171 108-461
HMMPfam PF01566 Nramp 4.4e-57 107-380
no_ID  
Coil coil coiled-coil NA 33-54
HMMPanther PTHR11706:SF10 METAL 8.6e-171 108-461
Seg seg seg NA 238-249
430-446
Pseudomolecule
Chromosome Start End Strand
426996192703705-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00030.1 maker exon 81724 81912 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:1
Zjn_sc00030.1 maker exon 82112 82152 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:2
Zjn_sc00030.1 maker exon 83182 83275 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:3
Zjn_sc00030.1 maker exon 83517 83698 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:4
Zjn_sc00030.1 maker exon 83805 83874 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:5
Zjn_sc00030.1 maker exon 83980 84231 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:6
Zjn_sc00030.1 maker exon 84283 84387 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:7
Zjn_sc00030.1 maker exon 84686 84817 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:8
Zjn_sc00030.1 maker exon 85490 85810 . + . ID=Zjn_sc00030.1.g00070.1.sm.mkhc:exon:9

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