Z. japonica Nagirizaki
Zjn_sc00029.1.g05960.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G06410.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 906 1 871 0.0 93.9 63.7 77.8
Subject 851 2 838
Annot | Symbols: ATTPS7, TPS7, ATTPSA | trehalose-phosphatase/synthase 7 | chr1:1955413-1958153 FORWARD LENGTH=851
NR ref|XP_002458490.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 906 1 906 0.0 100.4 90 95.3
Subject 910 2 910
Annot hypothetical protein SORBIDRAFT_03g034640 [Sorghum bicolor] gi|241930465|gb|EES03610.1| hypothetical protein SORBIDRAFT_03g034640 [Sorghum bicolor]
IRGSP Os01t0749400-02_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 906 1 905 0.0 100.8 87.9 93
Subject 913 2 913
Annot
Sbicolor Sobic.003G296000.2.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 906 1 906 0.0 100.4 90 95.3
Subject 910 2 910
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00029.1.g05960.1.sm.mkhc length: 906 aa.
IPR001830 Glycosyl transferase, family 20
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005992 trehalose biosynthetic process    
HMMPfam PF00982 Glyco_transf_20 1.1e-173 77-576
IPR003337 Trehalose-phosphatase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005992 trehalose biosynthetic process    
HMMPfam PF02358 Trehalose_PPase 2.3e-74 625-855
HMMTigr TIGR00685 T6PP: 2.9e-37 621-867
IPR006379 HAD-superfamily hydrolase, subfamily IIB
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMTigr TIGR01484 HAD-SF-IIB: 7.5e-19 623-820
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 1.9e-40 774-872
superfamily SSF56784 HAD-like 9e-48 622-867
no_ID  
Gene3D G3DSA:3.40.50.2000 no description 2.2e-76 76-349
350-559
HMMPanther PTHR10788 TREHALOSE-6-PHOSPHATE 0 36-871
HMMPanther PTHR10788:SF6 TREHALOSE-6-PHOSPHATE 0 36-871
Seg seg seg NA 20-34
182-200
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 4.3e-149 76-580
Pseudomolecule
Chromosome Start End Strand
61429615114302910-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00029.1 maker exon 2651762 2655430 . - . ID=Zjn_sc00029.1.g05960.1.sm.mkhc:exon:3
Zjn_sc00029.1 maker exon 2655955 2656219 . - . ID=Zjn_sc00029.1.g05960.1.sm.mkhc:exon:2
Zjn_sc00029.1 maker exon 2656444 2658521 . - . ID=Zjn_sc00029.1.g05960.1.sm.mkhc:exon:1

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