Z. japonica Nagirizaki
Zjn_sc00029.1.g05090.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G64060.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 3 791 0.0 119.3 73.1 82.6
Subject 944 150 944
Annot | Symbols: ATRBOH F, ATRBOHF, RBOHAP108, RBOHF, RBOH F | respiratory burst oxidase protein F | chr1:23770266-23776317 FORWARD LENGTH=944
NR tpg|DAA57760.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 65 791 0.0 119.2 88.9 90.8
Subject 943 217 943
Annot TPA: respiratory burst oxidase protein B [Zea mays]
IRGSP Os05t0528000-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 30 791 0.0 120.2 85.8 90.3
Subject 951 183 951
Annot
Sbicolor Sobic.003G287400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 791 65 791 0.0 119.3 88.6 90.5
Subject 944 218 944
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00029.1.g05090.1.sm.mkhc length: 791 aa.
IPR000778 Cytochrome b245, heavy chain
method AccNumber shortName E-value location
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00466 GP91PHOX 9.2e-19 369-392
569-582
592-609
IPR002048 EF-hand domain
Molecular Function GO:0005509 calcium ion binding    
ProfileScan PS50222 EF_HAND_2 5.085 89-105
106-141
150-185
IPR011992 EF-hand domain pair
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 6.8e-05 84-122
123-181
IPR013112 FAD-binding 8
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08022 FAD_binding_8 3.1e-31 466-580
IPR013121 Ferric reductase, NAD binding
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08030 NAD_binding_6 3.3e-52 587-773
IPR013130 Ferric reductase transmembrane component-like domain
HMMPfam PF01794 Ferric_reduct 1.1e-17 269-424
IPR013623 NADPH oxidase Respiratory burst
Molecular Function GO:0004601 peroxidase activity    
Molecular Function GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08414 NADPH_Ox 1.1e-14 65-109
IPR017927 Ferredoxin reductase-type FAD-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51384 FAD_FR 15.434 463-583
IPR017938 Riboflavin synthase-like beta-barrel
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
superfamily SSF63380 Riboflavin 1.6e-17 464-582
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 119-131
no_ID  
Coil coil coiled-coil NA 137-158
Gene3D G3DSA:2.40.30.10 no description 1.3e-11 468-541
Gene3D G3DSA:3.40.50.80 no description 3.9e-12 734-791
HMMPanther PTHR11972 NADPH 0 65-791
HMMPanther PTHR11972:SF5 RESPIRATORY 0 65-791
Seg seg seg NA 5-15
26-44
superfamily SSF47473 EF-hand 1.6e-14 86-193
superfamily SSF52343 Ferredoxin 1.2e-11 583-791
Pseudomolecule
Chromosome Start End Strand
61391139513918642+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00029.1 maker exon 2267006 2267195 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:1
Zjn_sc00029.1 maker exon 2268007 2268166 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:2
Zjn_sc00029.1 maker exon 2268319 2268367 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:3
Zjn_sc00029.1 maker exon 2269176 2269289 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:4
Zjn_sc00029.1 maker exon 2269996 2270418 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:5
Zjn_sc00029.1 maker exon 2271087 2271470 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:6
Zjn_sc00029.1 maker exon 2271557 2271652 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:7
Zjn_sc00029.1 maker exon 2271731 2271846 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:8
Zjn_sc00029.1 maker exon 2271976 2272143 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:9
Zjn_sc00029.1 maker exon 2272231 2272390 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:10
Zjn_sc00029.1 maker exon 2272533 2272730 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:11
Zjn_sc00029.1 maker exon 2272834 2272962 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:12
Zjn_sc00029.1 maker exon 2273112 2273190 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:13
Zjn_sc00029.1 maker exon 2273584 2274000 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:14
Zjn_sc00029.1 maker exon 2274025 2274253 . + . ID=Zjn_sc00029.1.g05090.1.sm.mkhc:exon:15

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