Z. japonica Nagirizaki
Zjn_sc00029.1.g04550.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G10700.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 321 2 321 e-151 128 77.3 89.7
Subject 411 93 411
Annot | Symbols: PRS3 | phosphoribosyl pyrophosphate (PRPP) synthase 3 | chr1:3554157-3556274 FORWARD LENGTH=411
NR ref|XP_004969799.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 321 1 321 e-177 126.2 93.5 98.1
Subject 405 85 405
Annot PREDICTED: ribose-phosphate pyrophosphokinase 3, chloroplastic-like [Setaria italica]
IRGSP Os01t0723600-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 321 1 321 e-180 127.4 93.1 97.2
Subject 409 89 409
Annot
Sbicolor Sobic.003G281200.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 321 1 321 e-176 126.8 91.3 95.6
Subject 407 87 407
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00029.1.g04550.1.sm.mkhc length: 321 aa.
IPR000836 Phosphoribosyltransferase domain
method AccNumber shortName E-value location
Biological Process GO:0009116 nucleoside metabolic process    
HMMPfam PF00156 Pribosyltran 2.1e-09 155-260
IPR005946 Ribose-phosphate diphosphokinase
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0004749 ribose phosphate diphosphokinase activity    
Biological Process GO:0009165 nucleotide biosynthetic process    
HMMTigr TIGR01251 ribP_PPkin: 3.5e-34 13-319
no_ID  
Coil coil coiled-coil NA 16-37
Gene3D G3DSA:3.40.50.2020 no description 7.1e-25 8-174
175-295
HMMPanther PTHR10210 RIBOSE-PHOSPHATE 1.5e-100 4-320
HMMPfam PF13793 Pribosyltran_N 3.1e-07 12-125
superfamily SSF53271 PRTase-like 3.9e-17 175-319
7-175
Pseudomolecule
Chromosome Start End Strand
61371857013722246+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00029.1 maker exon 2074181 2074309 . + . ID=Zjn_sc00029.1.g04550.1.sm.mkhc:exon:1
Zjn_sc00029.1 maker exon 2074931 2075246 . + . ID=Zjn_sc00029.1.g04550.1.sm.mkhc:exon:2
Zjn_sc00029.1 maker exon 2075365 2075460 . + . ID=Zjn_sc00029.1.g04550.1.sm.mkhc:exon:3
Zjn_sc00029.1 maker exon 2075557 2075625 . + . ID=Zjn_sc00029.1.g04550.1.sm.mkhc:exon:4
Zjn_sc00029.1 maker exon 2075740 2075868 . + . ID=Zjn_sc00029.1.g04550.1.sm.mkhc:exon:5
Zjn_sc00029.1 maker exon 2076042 2076141 . + . ID=Zjn_sc00029.1.g04550.1.sm.mkhc:exon:6
Zjn_sc00029.1 maker exon 2077193 2077857 . + . ID=Zjn_sc00029.1.g04550.1.sm.mkhc:exon:7

Top