Z. japonica Nagirizaki
Zjn_sc00029.1.g03060.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G29840.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 1 240 e-114 217.4 78.1 87.6
Subject 526 285 524
Annot | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr4:14599434-14601014 REVERSE LENGTH=526
NR ref|XP_002458353.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 1 238 e-132 219 94.6 95.9
Subject 530 292 529
Annot hypothetical protein SORBIDRAFT_03g031880 [Sorghum bicolor] gi|241930328|gb|EES03473.1| hypothetical protein SORBIDRAFT_03g031880 [Sorghum bicolor]
IRGSP Os01t0693800-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 1 238 e-133 216.9 92.6 95
Subject 525 287 524
Annot
Sbicolor Sobic.003G265400.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 242 1 238 e-135 219 94.6 95.9
Subject 530 292 529
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00029.1.g03060.1.sm.mk length: 242 aa.
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
method AccNumber shortName E-value location
HMMPfam PF00291 PALP 1.3e-25 19-188
superfamily SSF53686 Tryptophan 1.5e-60 1-242
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 7.5e-41 2-207
HMMPanther PTHR10314 SER/THR 4.3e-175 1-240
HMMPanther PTHR10314:SF50 SUBFAMILY 4.3e-175 1-240
Pseudomolecule
Chromosome Start End Strand
61301241613013805-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00029.1 maker_non_over exon 1368027 1368046 . - . ID=Zjn_sc00029.1.g03060.1.sm.mk:exon:2
Zjn_sc00029.1 maker_non_over exon 1368708 1369416 . - . ID=Zjn_sc00029.1.g03060.1.sm.mk:exon:1

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