Z. japonica Nagirizaki
Zjn_sc00029.1.g02480.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT2G01120.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 141 13 140 7e-33 296.5 48.9 67.4
Subject 418 7 151
Annot | Symbols: ORC4, ATORC4 | origin recognition complex subunit 4 | chr2:85444-88027 FORWARD LENGTH=418
NR gb|EMS52251.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 141 15 127 2e-52 254.6 69.5 74.5
Subject 359 13 125
Annot Origin recognition complex subunit 4 [Triticum urartu]
IRGSP Os01t0683400-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 141 20 123 4e-42 333.3 66 69.5
Subject 470 18 183
Annot
Sbicolor Sobic.003G259600.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 141 7 123 8e-54 299.3 72.3 77.3
Subject 422 2 135
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00029.1.g02480.1.sm.mk length: 141 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.40.50.300 no description 0.00016 51-97
HMMPanther PTHR12087 ORIGIN 2.7e-17 1-108
HMMPanther PTHR12087:SF0 SUBFAMILY 2.7e-17 1-108
HMMPfam PF13191 AAA_16 2.8e-06 44-127
Seg seg seg NA 2-19
Pseudomolecule
Chromosome Start End Strand
61275272312760249+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00029.1 maker_non_over exon 1108334 1108461 . + . ID=Zjn_sc00029.1.g02480.1.sm.mk:exon:1
Zjn_sc00029.1 maker_non_over exon 1108570 1108660 . + . ID=Zjn_sc00029.1.g02480.1.sm.mk:exon:2
Zjn_sc00029.1 maker_non_over exon 1108800 1108856 . + . ID=Zjn_sc00029.1.g02480.1.sm.mk:exon:3
Zjn_sc00029.1 maker_non_over exon 1109083 1109130 . + . ID=Zjn_sc00029.1.g02480.1.sm.mk:exon:4
Zjn_sc00029.1 maker_non_over exon 1109403 1109446 . + . ID=Zjn_sc00029.1.g02480.1.sm.mk:exon:5
Zjn_sc00029.1 maker_non_over exon 1112629 1112659 . + . ID=Zjn_sc00029.1.g02480.1.sm.mk:exon:6
Zjn_sc00029.1 maker_non_over exon 1115834 1115860 . + . ID=Zjn_sc00029.1.g02480.1.sm.mk:exon:7

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