Z. japonica Nagirizaki
Zjn_sc00029.1.g02100.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR ref|XP_012701631.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 139 77 139 3e-21 184.9 38.1 38.8
Subject 257 154 216
Annot PREDICTED: transcription factor-like protein DPB [Setaria italica]
IRGSP Os01t0678700-01_chr01_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 139 65 139 2e-21 211.5 37.4 41
Subject 294 168 249
Annot
Sbicolor Sobic.003G256300.1.p|Chr03|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 139 77 139 2e-21 184.2 34.5 37.4
Subject 256 151 213
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00029.1.g02100.1.sm.mkhc length: 139 aa.
IPR011991 Winged helix-turn-helix DNA-binding domain
method AccNumber shortName E-value location
Gene3D G3DSA:1.10.10.10 no description 2.7e-07 49-108
IPR014889 Transcription factor DP, C-terminal
HMMPfam PF08781 DP 5.3e-11 77-132
no_ID  
Coil coil coiled-coil NA 80-108
superfamily SSF144074 E2F-DP 7e-09 70-132
Pseudomolecule
Chromosome Start End Strand
61262022912623282-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00029.1 maker exon 975840 975863 . - . ID=Zjn_sc00029.1.g02100.1.sm.mkhc:exon:6
Zjn_sc00029.1 maker exon 976604 976699 . - . ID=Zjn_sc00029.1.g02100.1.sm.mkhc:exon:5
Zjn_sc00029.1 maker exon 976806 976874 . - . ID=Zjn_sc00029.1.g02100.1.sm.mkhc:exon:4
Zjn_sc00029.1 maker exon 977742 977785 . - . ID=Zjn_sc00029.1.g02100.1.sm.mkhc:exon:3
Zjn_sc00029.1 maker exon 978537 978649 . - . ID=Zjn_sc00029.1.g02100.1.sm.mkhc:exon:2
Zjn_sc00029.1 maker exon 978768 978893 . - . ID=Zjn_sc00029.1.g02100.1.sm.mkhc:exon:1

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