Z. japonica Nagirizaki
Zjn_sc00028.1.g03320.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 No_hits
NR gb|EEE66677.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 176 11 124 5e-46 212.5 49.4 55.7
Subject 374 34 145
Annot hypothetical protein OsJ_23324 [Oryza sativa Japonica Group]
IRGSP Os12t0133100-02_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 176 3 166 4e-28 285.2 47.2 59.7
Subject 502 5 246
Annot
Sbicolor Sobic.008G015800.3.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 176 1 124 3e-47 252.8 58 61.9
Subject 445 1 163
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g03320.1.sm.mk length: 176 aa.
IPR016196 Major facilitator superfamily domain, general substrate transporter
method AccNumber shortName E-value location
superfamily SSF103473 MFS 0.0061 57-120
123-170
no_ID  
Gene3D G3DSA:1.20.1250.20 no description 0.00024 81-168
HMMPanther PTHR24526 FAMILY 1.1e-33 8-80
HMMPanther PTHR24526:SF22 SUBFAMILY 1.1e-33 8-80
Seg seg seg NA 2-17
105-119
152-165
Pseudomolecule
Chromosome Start End Strand
15601165607331+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker_non_over exon 2197741 2197829 . - . ID=Zjn_sc00028.1.g03320.1.sm.mk:exon:6
Zjn_sc00028.1 maker_non_over exon 2198195 2198276 . - . ID=Zjn_sc00028.1.g03320.1.sm.mk:exon:5
Zjn_sc00028.1 maker_non_over exon 2201734 2201796 . - . ID=Zjn_sc00028.1.g03320.1.sm.mk:exon:4
Zjn_sc00028.1 maker_non_over exon 2201881 2201934 . - . ID=Zjn_sc00028.1.g03320.1.sm.mk:exon:3
Zjn_sc00028.1 maker_non_over exon 2202275 2202351 . - . ID=Zjn_sc00028.1.g03320.1.sm.mk:exon:2
Zjn_sc00028.1 maker_non_over exon 2203742 2203907 . - . ID=Zjn_sc00028.1.g03320.1.sm.mk:exon:1

Top