Z. japonica Nagirizaki
Zjn_sc00028.1.g03300.1.sm.mk
Sequence
-
BLAST
| TAIR10 |
No_hits |
| NR |
gb|ABA91341.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
132 |
78 |
129 |
2e-14 |
301.5 |
32.6 |
37.1 |
| Subject |
398 |
328 |
396 |
|
| Annot |
major facilitator superfamily antiporter, putative, expressed [Oryza sativa Japonica Group] |
| IRGSP |
Os11t0136400-00_chr11_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
132 |
37 |
76 |
2e-14 |
157.6 |
24.2 |
28 |
| Subject |
208 |
20 |
59 |
|
| Annot |
|
| Sbicolor |
Sobic.008G015800.5.p|Chr08|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
132 |
78 |
132 |
2e-18 |
295.5 |
33.3 |
38.6 |
| Subject |
390 |
314 |
385 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00028.1.g03300.1.sm.mk |
length: 132 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
0.00031 |
37-122 |
| Seg |
seg |
seg |
NA |
61-75 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 15 | 610751 | 617867 | +
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00028.1 |
maker_non_over |
exon |
2187205 |
2187293 |
. |
- |
. |
ID=Zjn_sc00028.1.g03300.1.sm.mk:exon:5 |
| Zjn_sc00028.1 |
maker_non_over |
exon |
2188173 |
2188254 |
. |
- |
. |
ID=Zjn_sc00028.1.g03300.1.sm.mk:exon:4 |
| Zjn_sc00028.1 |
maker_non_over |
exon |
2192111 |
2192173 |
. |
- |
. |
ID=Zjn_sc00028.1.g03300.1.sm.mk:exon:3 |
| Zjn_sc00028.1 |
maker_non_over |
exon |
2192251 |
2192304 |
. |
- |
. |
ID=Zjn_sc00028.1.g03300.1.sm.mk:exon:2 |
| Zjn_sc00028.1 |
maker_non_over |
exon |
2194211 |
2194321 |
. |
- |
. |
ID=Zjn_sc00028.1.g03300.1.sm.mk:exon:1 |