Z. japonica Nagirizaki
Zjn_sc00028.1.g03220.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G24090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 680 1 680 0.0 99.6 77.4 85.7
Subject 677 1 677
Annot | Symbols: | glutamine-fructose-6-phosphate transaminase (isomerizing)s;sugar binding;transaminases | chr3:8697838-8700971 REVERSE LENGTH=677
NR ref|NP_001296820.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 680 1 680 0.0 100 93.2 96.3
Subject 680 1 680
Annot uncharacterized protein LOC100194010 [Zea mays] gi|224030503|gb|ACN34327.1| unknown [Zea mays] gi|414882060|tpg|DAA59191.1| TPA: hypothetical protein ZEAMMB73_508677 [Zea mays]
IRGSP Os12t0131100-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 680 361 680 e-174 47.1 44.7 45.7
Subject 320 1 320
Annot
Sbicolor Sobic.008G016900.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 680 1 680 0.0 99.3 92.6 95.9
Subject 675 1 675
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g03220.1.sm.mkhc length: 680 aa.
IPR001347 Sugar isomerase (SIS)
method AccNumber shortName E-value location
Biological Process GO:0005975 carbohydrate metabolic process    
Molecular Function GO:0030246 carbohydrate binding    
HMMPfam PF01380 SIS 1.6e-21 360-486
531-662
ProfileScan PS51464 SIS 21.168 356-496
527-670
IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising
Molecular Function GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity    
Biological Process GO:0016051 carbohydrate biosynthetic process    
HMMPanther PTHR10937:SF0 GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE 0 2-680
HMMTigr TIGR01135 glmS: 1.8e-162 70-678
IPR017932 Glutamine amidotransferase type 2 domain
ProfileScan PS51278 GATASE_TYPE_2 37.429 2-284
no_ID  
Gene3D G3DSA:3.40.50.10490 no description 6e-52 314-511
512-679
Gene3D G3DSA:3.60.20.10 no description 3.9e-66 2-299
HMMPanther PTHR10937 GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE 0 2-680
HMMPfam PF13522 GATase_6 1.5e-16 98-214
Seg seg seg NA 41-68
340-354
423-434
superfamily SSF53697 SIS 2.9e-107 316-680
superfamily SSF56235 N-terminal 2.4e-57 2-290
Pseudomolecule
Chromosome Start End Strand
15667995673416+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker exon 2131656 2132183 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:11
Zjn_sc00028.1 maker exon 2132288 2132456 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:10
Zjn_sc00028.1 maker exon 2132544 2132799 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:9
Zjn_sc00028.1 maker exon 2132890 2133004 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:8
Zjn_sc00028.1 maker exon 2133095 2133345 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:7
Zjn_sc00028.1 maker exon 2133457 2133778 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:6
Zjn_sc00028.1 maker exon 2134031 2134192 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:5
Zjn_sc00028.1 maker exon 2134373 2134512 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:4
Zjn_sc00028.1 maker exon 2135503 2135614 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:3
Zjn_sc00028.1 maker exon 2136078 2136250 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:2
Zjn_sc00028.1 maker exon 2136819 2137077 . - . ID=Zjn_sc00028.1.g03220.1.sm.mkhc:exon:1

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