Z. japonica Nagirizaki
Zjn_sc00028.1.g02880.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT3G47930.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 586 39 578 0.0 104.1 68.3 80
Subject 610 60 606
Annot | Symbols: ATGLDH, GLDH | L-galactono-1,4-lactone dehydrogenase | chr3:17684500-17687426 FORWARD LENGTH=610
NR ref|XP_004977506.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 586 22 582 0.0 99 88.6 92.7
Subject 580 20 579
Annot PREDICTED: L-galactono-1,4-lactone dehydrogenase 2, mitochondrial [Setaria italica]
IRGSP Os12t0139600-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 586 1 583 0.0 99.5 86.5 92
Subject 583 1 581
Annot
Sbicolor Sobic.005G031000.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 586 1 586 0.0 99.8 89.9 94.5
Subject 585 1 585
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g02880.1.am.mkhc length: 586 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 4.1e-27 103-234
IPR007173 D-arabinono-1,4-lactone oxidase
Molecular Function GO:0003885 D-arabinono-1,4-lactone oxidase activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF04030 ALO 2.9e-16 261-574
IPR010029 Galactonolactone dehydrogenase
Molecular Function GO:0016633 galactonolactone dehydrogenase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPanther PTHR13878:SF6 GALACTONO-1,4-LACTONE 0 22-580
HMMTigr TIGR01676 GLDHase: 0 41-576
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 17.386 97-268
superfamily SSF56176 FAD-binding 3.3e-43 71-268
IPR016167 FAD-binding, type 2, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.43.10 no description 1.9e-09 90-157
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 1.2e-27 158-266
IPR023595 L-gulonolactone/D-arabinono-1,4-lactone oxidase
Cellular Component GO:0016020 membrane    
Molecular Function GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor    
Biological Process GO:0055114 oxidation-reduction process    
HMMPIR PIRSF000136 L-gulonolactone/D-arabinono-1,4-lactone 1e-17 74-581
no_ID  
HMMPanther PTHR13878 GULONOLACTONE 0 22-580
Seg seg seg NA 2-33
47-63
153-168
537-548
Pseudomolecule
Chromosome Start End Strand
15849701857045-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker exon 1948027 1948638 . + . ID=Zjn_sc00028.1.g02880.1.am.mkhc:exon:1
Zjn_sc00028.1 maker exon 1952409 1952659 . + . ID=Zjn_sc00028.1.g02880.1.am.mkhc:exon:2
Zjn_sc00028.1 maker exon 1952752 1952934 . + . ID=Zjn_sc00028.1.g02880.1.am.mkhc:exon:3
Zjn_sc00028.1 maker exon 1953481 1953883 . + . ID=Zjn_sc00028.1.g02880.1.am.mkhc:exon:4
Zjn_sc00028.1 maker exon 1954382 1954522 . + . ID=Zjn_sc00028.1.g02880.1.am.mkhc:exon:5
Zjn_sc00028.1 maker exon 1954715 1955371 . + . ID=Zjn_sc00028.1.g02880.1.am.mkhc:exon:6

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