Z. japonica Nagirizaki
Zjn_sc00028.1.g02320.1.am.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G08080.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 152 394 8e-57 68.2 24.3 37.7
Subject 275 35 273
Annot | Symbols: ATACA7, ACA7 | alpha carbonic anhydrase 7 | chr1:2517022-2518546 REVERSE LENGTH=275
NR ref|NP_001140512.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 148 403 e-105 69.2 44.2 53.1
Subject 279 24 279
Annot uncharacterized protein LOC100272575 precursor [Zea mays] gi|194699790|gb|ACF83979.1| unknown [Zea mays] gi|414588585|tpg|DAA39156.1| TPA: hypothetical protein ZEAMMB73_858440 [Zea mays]
IRGSP Os12t0153500-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 150 402 7e-92 69.7 38.7 47.4
Subject 281 26 277
Annot
Sbicolor Sobic.005G039000.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 157 403 e-103 69 41.7 50.9
Subject 278 33 278
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g02320.1.am.mk length: 403 aa.
IPR001148 Alpha carbonic anhydrase
method AccNumber shortName E-value location
Gene3D G3DSA:3.10.200.10 no description 2.4e-64 155-390
HMMPfam PF00194 Carb_anhydrase 4.8e-36 163-390
HMMSmart SM01057 Eukaryotic-type 1.7e-72 159-391
ProfileScan PS51144 ALPHA_CA_2 51.692 155-393
superfamily SSF51069 Carbonic 4.4e-67 155-391
IPR018338 Carbonic anhydrase, alpha-class, conserved site
Molecular Function GO:0004089 carbonate dehydratase activity    
Biological Process GO:0006730 one-carbon metabolic process    
Molecular Function GO:0008270 zinc ion binding    
PatternScan PS00162 ALPHA_CA_1 NA 252-268
IPR023561 Carbonic anhydrase, alpha-class
HMMPanther PTHR18952 CARBONIC 2.3e-92 136-399
no_ID  
HMMPanther PTHR18952:SF2 CARBONIC 2.3e-92 136-399
Seg seg seg NA 16-28
87-106
210-219
Pseudomolecule
Chromosome Start End Strand
1511266211129134+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker_non_over exon 1675938 1676267 . - . ID=Zjn_sc00028.1.g02320.1.am.mk:exon:4
Zjn_sc00028.1 maker_non_over exon 1676371 1676580 . - . ID=Zjn_sc00028.1.g02320.1.am.mk:exon:3
Zjn_sc00028.1 maker_non_over exon 1676707 1677168 . - . ID=Zjn_sc00028.1.g02320.1.am.mk:exon:2
Zjn_sc00028.1 maker_non_over exon 1678242 1678451 . - . ID=Zjn_sc00028.1.g02320.1.am.mk:exon:1

Top