Z. japonica Nagirizaki
Zjn_sc00028.1.g01730.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G21200.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 359 18 340 2e-62 123.4 45.7 62.7
Subject 443 63 433
Annot | Symbols: | sequence-specific DNA binding transcription factors | chr1:7421483-7422814 FORWARD LENGTH=443
NR ref|XP_012703139.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 359 4 340 e-149 124.2 76.9 83.8
Subject 446 59 422
Annot PREDICTED: uncharacterized protein LOC101777650 [Setaria italica] gi|836005420|ref|XP_012703140.1| PREDICTED: uncharacterized protein LOC101777650 [Setaria italica]
IRGSP Os12t0163500-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 359 4 340 e-135 120.3 71 80.8
Subject 432 49 413
Annot
Sbicolor Sobic.008G047300.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 359 4 340 e-151 124.5 77.2 83
Subject 447 60 426
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g01730.1.sm.mkhc length: 359 aa.
no_ID  
method AccNumber shortName E-value location
Coil coil coiled-coil NA 283-311
313-343
HMMPanther PTHR31292 FAMILY 7.2e-124 49-359
HMMPfam PF13837 Myb_DNA-bind_4 8.5e-15 71-157
Seg seg seg NA 195-214
245-255
Pseudomolecule
Chromosome Start End Strand
1514743521485376+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker exon 1319696 1321218 . - . ID=Zjn_sc00028.1.g01730.1.sm.mkhc:exon:4
Zjn_sc00028.1 maker exon 1328758 1329632 . - . ID=Zjn_sc00028.1.g01730.1.sm.mkhc:exon:3
Zjn_sc00028.1 maker exon 1329702 1329842 . - . ID=Zjn_sc00028.1.g01730.1.sm.mkhc:exon:2
Zjn_sc00028.1 maker exon 1330717 1330720 . - . ID=Zjn_sc00028.1.g01730.1.sm.mkhc:exon:1

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