Z. japonica Nagirizaki
Zjn_sc00028.1.g01540.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G77590.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 585 1 531 0.0 118.1 66.3 77.8
Subject 691 1 568
Annot | Symbols: LACS9 | long chain acyl-CoA synthetase 9 | chr1:29148501-29151776 REVERSE LENGTH=691
NR ref|XP_008662512.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 585 1 531 0.0 119.3 83.2 87
Subject 698 1 575
Annot PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic-like [Zea mays] gi|413916245|gb|AFW56177.1| hypothetical protein ZEAMMB73_064891 [Zea mays]
IRGSP Os12t0168700-02_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 585 1 531 0.0 119.3 81 86
Subject 698 1 575
Annot
Sbicolor Sobic.008G051300.2.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 585 1 531 0.0 119.3 83.1 87
Subject 698 1 575
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g01540.1.am.mkhc length: 585 aa.
IPR000873 AMP-dependent synthetase/ligase
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMPfam PF00501 AMP-binding 9.4e-08 101-486
492-521
IPR020845 AMP-binding, conserved site
PatternScan PS00455 AMP_BINDING NA 257-268
no_ID  
Gene3D G3DSA:3.40.50.980 no description 1.6e-32 59-263
412-478
HMMPanther PTHR24096 FAMILY 1.9e-144 54-531
Seg seg seg NA 301-320
superfamily SSF56801 Acetyl-CoA 4.9e-89 60-578
Pseudomolecule
Chromosome Start End Strand
1515864871591530+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker exon 1213542 1214044 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:9
Zjn_sc00028.1 maker exon 1214465 1214599 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:8
Zjn_sc00028.1 maker exon 1215118 1215235 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:7
Zjn_sc00028.1 maker exon 1215386 1215615 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:6
Zjn_sc00028.1 maker exon 1215722 1215895 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:5
Zjn_sc00028.1 maker exon 1215977 1216108 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:4
Zjn_sc00028.1 maker exon 1216273 1216545 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:3
Zjn_sc00028.1 maker exon 1216760 1216840 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:2
Zjn_sc00028.1 maker exon 1218111 1218585 . - . ID=Zjn_sc00028.1.g01540.1.am.mkhc:exon:1

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