Z. japonica Nagirizaki
Zjn_sc00028.1.g01290.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G38620.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 1 134 1e-69 166.9 69.2 75.7
Subject 282 1 134
Annot | Symbols: ATMYB4, MYB4 | myb domain protein 4 | chr4:18053866-18054876 FORWARD LENGTH=282
NR ref|XP_004977234.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 1 162 3e-76 116.6 86.4 89.3
Subject 197 1 179
Annot PREDICTED: myb-related protein Zm38-like [Setaria italica]
IRGSP Os11t0180900-00_chr11_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 1 167 5e-72 174.6 80.5 88.8
Subject 295 1 202
Annot
Sbicolor Sobic.005G062000.1.p|Chr05|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 169 1 159 1e-71 258 72.2 81.7
Subject 436 122 279
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g01290.1.am.mkhc length: 169 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 4.5e-16 14-61
67-111
HMMSmart SM00717 SANT 2.6e-17 13-63
66-114
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.3e-27 5-64
65-116
superfamily SSF46689 Homeodomain-like 4.7e-27 14-113
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 17.526 62-116
9-61
no_ID  
HMMPanther PTHR10641 MYB-LIKE 1e-103 1-154
HMMPanther PTHR10641:SF203SUBFAMILY NOT 1e-103 1-154
Pseudomolecule
Chromosome Start End Strand
1517424411743467-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker exon 1061605 1061961 . + . ID=Zjn_sc00028.1.g01290.1.am.mkhc:exon:1
Zjn_sc00028.1 maker exon 1062069 1062631 . + . ID=Zjn_sc00028.1.g01290.1.am.mkhc:exon:2

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