Z. japonica Nagirizaki
Zjn_sc00028.1.g00990.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G09300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 63 465 0.0 101.5 61.7 75.1
Subject 472 70 472
Annot | Symbols: | Thiamin diphosphate-binding fold (THDP-binding) superfamily protein | chr5:2884282-2886797 REVERSE LENGTH=472
NR ref|XP_004977194.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 9 465 0.0 103.7 85.4 90.1
Subject 482 6 482
Annot PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial [Setaria italica]
IRGSP Os12t0183100-01_chr12_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 42 465 0.0 104.5 79.4 84.1
Subject 486 58 486
Annot
Sbicolor Sobic.008G062200.1.p|Chr08|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 465 23 465 0.0 108.8 83.9 89
Subject 506 46 506
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00028.1.g00990.1.am.mkhc length: 465 aa.
IPR001017 Dehydrogenase, E1 component
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor    
HMMPfam PF00676 E1_dh 2e-96 128-426
no_ID  
Gene3D G3DSA:3.40.50.970 no description 1.9e-151 65-446
HMMPanther PTHR11516 PYRUVATE 2.1e-226 35-462
HMMPanther PTHR11516:SF1 2-OXOISOVALERATE 2.1e-226 35-462
Seg seg seg NA 2-14
399-412
superfamily SSF52518 Thiamin 2.4e-112 97-460
Pseudomolecule
Chromosome Start End Strand
1519447071948826-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00028.1 maker exon 856246 856672 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:1
Zjn_sc00028.1 maker exon 857385 857522 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:2
Zjn_sc00028.1 maker exon 857626 857808 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:3
Zjn_sc00028.1 maker exon 857936 858093 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:4
Zjn_sc00028.1 maker exon 858191 858290 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:5
Zjn_sc00028.1 maker exon 858390 858501 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:6
Zjn_sc00028.1 maker exon 858582 858721 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:7
Zjn_sc00028.1 maker exon 858815 859000 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:8
Zjn_sc00028.1 maker exon 859099 860365 . + . ID=Zjn_sc00028.1.g00990.1.am.mkhc:exon:9

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