Z. japonica Nagirizaki
Zjn_sc00028.1.g00730.1.sm.mkhc
Sequence
-
BLAST
| TAIR10 |
AT1G22940.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
301 |
109 |
294 |
1e-63 |
173.4 |
44.9 |
50.5 |
| Subject |
522 |
269 |
515 |
|
| Annot |
| Symbols: TH1, TH-1, THIE | thiamin biosynthesis protein, putative | chr1:8122384-8124908 FORWARD LENGTH=522 |
| NR |
ref|XP_004977163.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
301 |
94 |
301 |
2e-89 |
181.4 |
58.5 |
62.5 |
| Subject |
546 |
286 |
546 |
|
| Annot |
PREDICTED: probable thiamine biosynthetic bifunctional enzyme, chloroplastic [Setaria italica] |
| IRGSP |
Os12t0192500-02_chr12_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
301 |
94 |
301 |
2e-78 |
182.1 |
52.5 |
57.1 |
| Subject |
548 |
289 |
548 |
|
| Annot |
|
| Sbicolor |
Sobic.008G067100.1.p|Chr08|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
301 |
94 |
301 |
3e-88 |
181.7 |
56.8 |
60.5 |
| Subject |
547 |
287 |
547 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00028.1.g00730.1.sm.mkhc |
length: 301 aa. |
| IPR003733 |
Thiamine phosphate synthase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004789 |
thiamine-phosphate diphosphorylase activity |
|
|
| Biological Process |
GO:0009228 |
thiamine biosynthetic process |
|
|
| HMMPfam |
PF02581 |
TMP-TENI |
5.4e-27 |
189-257 |
| IPR013749 |
Phosphomethylpyrimidine kinase type-1 |
| HMMPfam |
PF08543 |
Phos_pyr_kin |
2.1e-17 |
56-116 |
| IPR013785 |
Aldolase-type TIM barrel |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.20.20.70 |
no description |
7.3e-32 |
148-257 |
| IPR022998 |
Thiamin phosphate synthase superfamily |
| superfamily |
SSF51391 |
Thiamin |
1.6e-30 |
151-294 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.1190.20 |
no description |
3.6e-21 |
47-116 |
| HMMPanther |
PTHR20857 |
THIAMINE-PHOSPHATE |
5.6e-38 |
144-257 |
| HMMPanther |
PTHR20857:SF15 |
THIAMINE-PHOSPHATE |
5.6e-38 |
144-257 |
| Seg |
seg |
seg |
NA |
2-37 |
| superfamily |
SSF53613 |
Ribokinase-like |
2.4e-16 |
44-114 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 15 | 2145189 | 2152312 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00028.1 |
maker |
exon |
652760 |
653026 |
. |
+ |
. |
ID=Zjn_sc00028.1.g00730.1.sm.mkhc:exon:1 |
| Zjn_sc00028.1 |
maker |
exon |
653152 |
653226 |
. |
+ |
. |
ID=Zjn_sc00028.1.g00730.1.sm.mkhc:exon:2 |
| Zjn_sc00028.1 |
maker |
exon |
655684 |
655904 |
. |
+ |
. |
ID=Zjn_sc00028.1.g00730.1.sm.mkhc:exon:3 |
| Zjn_sc00028.1 |
maker |
exon |
659417 |
659625 |
. |
+ |
. |
ID=Zjn_sc00028.1.g00730.1.sm.mkhc:exon:4 |
| Zjn_sc00028.1 |
maker |
exon |
659750 |
659883 |
. |
+ |
. |
ID=Zjn_sc00028.1.g00730.1.sm.mkhc:exon:5 |