Z. japonica Nagirizaki
Zjn_sc00027.1.g06150.1.am.mkhc
Sequence
-
BLAST
| TAIR10 |
AT3G48730.1 |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
503 |
40 |
503 |
0.0 |
93.8 |
72.4 |
81.1 |
| Subject |
472 |
10 |
472 |
|
| Annot |
| Symbols: GSA2 | glutamate-1-semialdehyde 2,1-aminomutase 2 | chr3:18049697-18051550 FORWARD LENGTH=472 |
| NR |
ref|XP_004961658.1| |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
503 |
47 |
503 |
0.0 |
94 |
86.5 |
88.9 |
| Subject |
473 |
16 |
473 |
|
| Annot |
PREDICTED: glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic [Setaria italica] |
| IRGSP |
Os08t0532200-03_chr08_irgsp1_locus |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
503 |
47 |
503 |
0.0 |
95 |
85.1 |
88.5 |
| Subject |
478 |
21 |
478 |
|
| Annot |
|
| Sbicolor |
Sobic.009G180800.1.p|Chr09|gene |
|
Length |
Start |
End |
E-value |
Length(%) |
Iden(%) |
Posi(%) |
| Query |
503 |
47 |
503 |
0.0 |
94 |
85.3 |
88.3 |
| Subject |
473 |
16 |
473 |
|
| Annot |
|
InterProScan
A list of protein families, domains and functional sites (searches in
InterPro)
| Zjn_sc00027.1.g06150.1.am.mkhc |
length: 503 aa. |
| IPR004639 |
Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0033014 |
tetrapyrrole biosynthetic process |
|
|
| Molecular Function |
GO:0042286 |
glutamate-1-semialdehyde 2,1-aminomutase activity |
|
|
| HAMAP |
MF_00375 |
HemL_aminotrans_3 |
101.380 |
81-503 |
| HMMPanther |
PTHR11986:SF5 |
GLUTAMATE-1-SEMIALDEHYDE |
2.2e-200 |
80-503 |
| HMMTigr |
TIGR00713 |
hemL: |
4.2e-182 |
81-502 |
| IPR005814 |
Aminotransferase class-III |
| Molecular Function |
GO:0008483 |
transaminase activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| HMMPanther |
PTHR11986 |
AMINOTRANSFERASE |
2.2e-200 |
80-503 |
| HMMPfam |
PF00202 |
Aminotran_3 |
7.7e-64 |
117-414 |
| PatternScan |
PS00600 |
AA_TRANSFER_CLASS_3 |
NA |
312-348 |
| IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.40.640.10 |
no description |
1.4e-78 |
148-393 |
| IPR015422 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 2 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.90.1150.10 |
no description |
5.9e-37 |
396-502 |
| IPR015424 |
Pyridoxal phosphate-dependent transferase |
| superfamily |
SSF53383 |
PLP-dependent |
1.8e-127 |
77-503 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
27-74 |
Pseudomolecule
| Chromosome |
Start |
End |
Strand |
| 18 | 8641855 | 8644721 | -
|
Coding region
| scaffold |
source |
type |
start |
end |
score |
strand |
phase |
attributes |
| Zjn_sc00027.1 |
maker |
exon |
2535084 |
2535353 |
. |
+ |
. |
ID=Zjn_sc00027.1.g06150.1.am.mkhc:exon:1 |
| Zjn_sc00027.1 |
maker |
exon |
2536000 |
2536173 |
. |
+ |
. |
ID=Zjn_sc00027.1.g06150.1.am.mkhc:exon:2 |
| Zjn_sc00027.1 |
maker |
exon |
2536675 |
2537950 |
. |
+ |
. |
ID=Zjn_sc00027.1.g06150.1.am.mkhc:exon:3 |