Z. japonica Nagirizaki
Zjn_sc00027.1.g06010.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G32390.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 52 401 e-156 86.8 66.5 74.4
Subject 350 1 347
Annot | Symbols: | Nucleotide-sugar transporter family protein | chr4:15636550-15637602 FORWARD LENGTH=350
NR ref|NP_001055925.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 59 403 0.0 87.8 82.6 84.1
Subject 354 10 354
Annot Os05g0494500 [Oryza sativa Japonica Group] gi|52353475|gb|AAU44041.1| unknown protein [Oryza sativa Japonica Group] gi|113579476|dbj|BAF17839.1| Os05g0494500 [Oryza sativa Japonica Group] gi|215765557|dbj|BAG87254.1| unnamed protein product [Oryza sativa Japonica Group] gi|222632080|gb|EEE64212.1| hypothetical protein OsJ_19045 [Oryza sativa Japonica Group]
IRGSP Os05t0494500-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 59 403 0.0 87.8 82.6 84.1
Subject 354 10 354
Annot
Sbicolor Sobic.009G182200.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 403 59 403 e-179 88.6 81.6 83.1
Subject 357 13 357
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g06010.1.am.mkhc length: 403 aa.
IPR004853 Triose-phosphate transporter domain
method AccNumber shortName E-value location
HMMPfam PF03151 TPT 1e-34 222-361
no_ID  
HMMPanther PTHR11132 SOLUTE 4.7e-99 54-402
HMMPanther PTHR11132:SF14 SUBFAMILY 4.7e-99 54-402
Seg seg seg NA 5-60
116-127
298-311
superfamily SSF103481 Multidrug 0.00013 112-217
Pseudomolecule
Chromosome Start End Strand
1886917928693109+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker exon 2486696 2487896 . - . ID=Zjn_sc00027.1.g06010.1.am.mkhc:exon:2
Zjn_sc00027.1 maker exon 2488003 2488013 . - . ID=Zjn_sc00027.1.g06010.1.am.mkhc:exon:1

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