Z. japonica Nagirizaki
Zjn_sc00027.1.g05020.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G07960.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 579 1 579 0.0 120.7 76.2 83.1
Subject 699 135 699
Annot | Symbols: ATCSLC12, CSLC12 | Cellulose-synthase-like C12 | chr4:4802628-4805114 REVERSE LENGTH=699
NR ref|XP_006655475.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 579 11 579 0.0 109.8 90.3 92.2
Subject 636 87 636
Annot PREDICTED: probable xyloglucan glycosyltransferase 7-like [Oryza brachyantha]
IRGSP Os05t0510800-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 579 5 579 0.0 118.8 91.2 93.6
Subject 688 131 688
Annot
Sbicolor Sobic.009G194200.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 579 9 579 0.0 120.4 91.7 93.6
Subject 697 139 697
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g05020.1.sm.mkhc length: 579 aa.
no_ID  
method AccNumber shortName E-value location
Gene3D G3DSA:3.90.550.10 no description 1.7e-19 149-372
HMMPanther PTHR32044 FAMILY 0 1-579
HMMPanther PTHR32044:SF0 SUBFAMILY 0 1-579
HMMPfam PF13641 Glyco_tranf_2_3 1.7e-35 128-353
Seg seg seg NA 116-124
159-168
278-292
375-395
518-525
534-551
superfamily SSF53448 Nucleotide-diphospho-sugar 2.3e-42 137-396
Pseudomolecule
Chromosome Start End Strand
1891087879112781+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker exon 2067024 2068452 . - . ID=Zjn_sc00027.1.g05020.1.sm.mkhc:exon:6
Zjn_sc00027.1 maker exon 2068844 2068957 . - . ID=Zjn_sc00027.1.g05020.1.sm.mkhc:exon:5
Zjn_sc00027.1 maker exon 2069042 2069332 . - . ID=Zjn_sc00027.1.g05020.1.sm.mkhc:exon:4
Zjn_sc00027.1 maker exon 2069423 2069731 . - . ID=Zjn_sc00027.1.g05020.1.sm.mkhc:exon:3
Zjn_sc00027.1 maker exon 2070547 2070600 . - . ID=Zjn_sc00027.1.g05020.1.sm.mkhc:exon:2
Zjn_sc00027.1 maker exon 2070671 2071018 . - . ID=Zjn_sc00027.1.g05020.1.sm.mkhc:exon:1

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