Z. japonica Nagirizaki
Zjn_sc00027.1.g04320.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT1G06410.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 900 1 879 0.0 94.6 61 75.2
Subject 851 2 850
Annot | Symbols: ATTPS7, TPS7, ATTPSA | trehalose-phosphatase/synthase 7 | chr1:1955413-1958153 FORWARD LENGTH=851
NR ref|XP_002440081.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 900 1 889 0.0 100.7 82.8 90.4
Subject 906 2 893
Annot hypothetical protein SORBIDRAFT_09g025660 [Sorghum bicolor] gi|241945366|gb|EES18511.1| hypothetical protein SORBIDRAFT_09g025660 [Sorghum bicolor]
IRGSP Os05t0517200-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 900 1 889 0.0 99.9 79.1 88.8
Subject 899 2 886
Annot
Sbicolor Sobic.009G198900.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 900 1 889 0.0 100.7 82.8 90.4
Subject 906 2 893
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g04320.1.sm.mkhc length: 900 aa.
IPR001830 Glycosyl transferase, family 20
method AccNumber shortName E-value location
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005992 trehalose biosynthetic process    
HMMPfam PF00982 Glyco_transf_20 1e-161 74-571
IPR003337 Trehalose-phosphatase
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005992 trehalose biosynthetic process    
HMMPfam PF02358 Trehalose_PPase 3.2e-71 621-851
HMMTigr TIGR00685 T6PP: 4.5e-37 615-863
IPR006379 HAD-superfamily hydrolase, subfamily IIB
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0008152 metabolic process    
HMMTigr TIGR01484 HAD-SF-IIB: 1.2e-17 620-816
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 8.4e-38 770-867
superfamily SSF56784 HAD-like 1.4e-44 618-863
no_ID  
Gene3D G3DSA:3.40.50.2000 no description 4.6e-69 73-346
347-556
HMMPanther PTHR10788 TREHALOSE-6-PHOSPHATE 0 23-867
HMMPanther PTHR10788:SF6 TREHALOSE-6-PHOSPHATE 0 23-867
Seg seg seg NA 21-38
47-71
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 6.1e-138 73-576
Pseudomolecule
Chromosome Start End Strand
1895180749521788-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker exon 1658017 1660082 . + . ID=Zjn_sc00027.1.g04320.1.sm.mkhc:exon:1
Zjn_sc00027.1 maker exon 1660653 1660917 . + . ID=Zjn_sc00027.1.g04320.1.sm.mkhc:exon:2
Zjn_sc00027.1 maker exon 1661083 1661731 . + . ID=Zjn_sc00027.1.g04320.1.sm.mkhc:exon:3

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