Z. japonica Nagirizaki
Zjn_sc00027.1.g03910.1.sm.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT5G45720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 135 1e-51 335.4 36.5 42
Subject 966 576 715
Annot | Symbols: | AAA-type ATPase family protein | chr5:18543338-18546629 REVERSE LENGTH=966
NR dbj|BAK01135.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 252 e-103 377.8 67 75.7
Subject 1088 578 833
Annot predicted protein, partial [Hordeum vulgare subsp. vulgare]
IRGSP Os05t0529600-01_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 251 1e-89 376 64.9 73.6
Subject 1083 589 831
Annot
Sbicolor Sobic.009G207400.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 288 1 252 8e-98 377.1 70.5 77.8
Subject 1086 568 821
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g03910.1.sm.mkhc length: 288 aa.
IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006260 DNA replication    
superfamily SSF48019 DNA 1.3e-09 3-121
IPR022754 DNA polymerase III, gamma subunit, domain III
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
HMMPfam PF12169 DNA_pol3_gamma3 2.6e-05 2-57
no_ID  
Coil coil coiled-coil NA 68-99
Gene3D G3DSA:1.20.272.10 no description 0.00012 2-109
Seg seg seg NA 3-20
Pseudomolecule
Chromosome Start End Strand
1897433059746411+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker exon 1433394 1433445 . - . ID=Zjn_sc00027.1.g03910.1.sm.mkhc:exon:4
Zjn_sc00027.1 maker exon 1433916 1433976 . - . ID=Zjn_sc00027.1.g03910.1.sm.mkhc:exon:3
Zjn_sc00027.1 maker exon 1435429 1435974 . - . ID=Zjn_sc00027.1.g03910.1.sm.mkhc:exon:2
Zjn_sc00027.1 maker exon 1436293 1436500 . - . ID=Zjn_sc00027.1.g03910.1.sm.mkhc:exon:1

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