Z. japonica Nagirizaki
Zjn_sc00027.1.g03010.1.am.mkhc
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G17190.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 183 48 183 4e-42 186.9 50.8 61.7
Subject 342 153 342
Annot | Symbols: FPS2 | farnesyl diphosphate synthase 2 | chr4:9648743-9650865 REVERSE LENGTH=342
NR ref|XP_004961345.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 183 48 183 6e-55 193.4 66.7 68.9
Subject 354 165 354
Annot PREDICTED: farnesyl pyrophosphate synthase [Setaria italica]
IRGSP Os05t0543400-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 183 48 183 6e-56 194 64.5 68.9
Subject 355 166 355
Annot
Sbicolor Sobic.009G216800.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 183 48 183 6e-56 192.9 65.6 67.8
Subject 353 164 353
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g03010.1.am.mkhc length: 183 aa.
IPR000092 Polyprenyl synthetase
method AccNumber shortName E-value location
Biological Process GO:0008299 isoprenoid biosynthetic process    
HMMPfam PF00348 polyprenyl_synt 4.6e-22 2-48
50-144
PatternScan PS00444 POLYPRENYL_SYNTHASE_2 NA 119-131
IPR008949 Terpenoid synthase
Gene3D G3DSA:1.10.600.10 no description 4.6e-30 1-48
50-141
superfamily SSF48576 Terpenoid 4.1e-34 1-183
no_ID  
HMMPanther PTHR11525 FARNESYL-PYROPHOSPHATE 8.5e-61 1-183
HMMPanther PTHR11525:SF0 SUBFAMILY 8.5e-61 1-183
Pseudomolecule
Chromosome Start End Strand
181004026110043619-
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker exon 1136186 1136276 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:1
Zjn_sc00027.1 maker exon 1136873 1136897 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:2
Zjn_sc00027.1 maker exon 1136983 1137098 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:3
Zjn_sc00027.1 maker exon 1137805 1137893 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:4
Zjn_sc00027.1 maker exon 1138033 1138084 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:5
Zjn_sc00027.1 maker exon 1138183 1138278 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:6
Zjn_sc00027.1 maker exon 1138366 1138410 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:7
Zjn_sc00027.1 maker exon 1138988 1139544 . + . ID=Zjn_sc00027.1.g03010.1.am.mkhc:exon:8

Top