Z. japonica Nagirizaki
Zjn_sc00027.1.g02730.1.sm.mk
Sequence
Init: Term:
reverse complement
BLAST
TAIR10 AT4G29840.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 518 37 514 0.0 101.5 69.7 78.8
Subject 526 46 519
Annot | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent enzyme family protein | chr4:14599434-14601014 REVERSE LENGTH=526
NR ref|XP_012700495.1| Length Start End E-value Length(%) Iden(%) Posi(%)
Query 518 1 518 0.0 100.8 95.8 97.5
Subject 522 1 522
Annot PREDICTED: LOW QUALITY PROTEIN: threonine synthase, chloroplastic-like [Setaria italica]
IRGSP Os05t0549700-02_chr05_irgsp1_locus Length Start End E-value Length(%) Iden(%) Posi(%)
Query 518 1 518 0.0 100.6 92.7 95
Subject 521 1 521
Annot
Sbicolor Sobic.009G220000.1.p|Chr09|gene Length Start End E-value Length(%) Iden(%) Posi(%)
Query 518 1 518 0.0 101.5 94.4 96.5
Subject 526 1 526
Annot

InterProScan
A list of protein families, domains and functional sites (searches in InterPro)

Zjn_sc00027.1.g02730.1.sm.mk length: 518 aa.
IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site
method AccNumber shortName E-value location
Biological Process GO:0006520 cellular amino acid metabolic process    
Molecular Function GO:0030170 pyridoxal phosphate binding    
PatternScan PS00165 DEHYDRATASE_SER_THR NA 186-200
IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily
HMMPfam PF00291 PALP 3.3e-50 157-467
superfamily SSF53686 Tryptophan 5.9e-116 42-510
IPR004450 Threonine synthase-like
HMMTigr TIGR00260 thrC: 2.4e-62 146-473
no_ID  
Gene3D G3DSA:3.40.50.1100 no description 3.6e-53 238-482
HMMPanther PTHR10314 SER/THR 0 81-514
HMMPanther PTHR10314:SF50 SUBFAMILY 0 81-514
Seg seg seg NA 2-36
232-241
Pseudomolecule
Chromosome Start End Strand
181015217810153734+
Coding region
scaffold source type start end score strand phase attributes
Zjn_sc00027.1 maker_non_over exon 1026071 1027627 . - . ID=Zjn_sc00027.1.g02730.1.sm.mk:exon:1

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